Gene VIBHAR_04770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04770 
Symbol 
ID5557110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp35934 
End bp37043 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content49% 
IMG OID640909249 
Producthydrolase 
Protein accessionYP_001446906 
Protein GI156976000 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGAT TAGCAAGCAA AGTTACTCTA CTCATAAGCA GTCTGTTCCT ATTTGGTTGT 
GAAGATCCCC AACAAAAAAA TATGGGCACG TTGCTGGGTA GTGGAGATAC GCAAAGCGAG
AGCAAGCTAT TCACACCCGT AGAAAAAGGG GTTGAACTCA CCTTTCCTAC CGATCATCAA
GCTCACCCAA ACTTTCGTCA TGAATGGTGG TACTTAACCG CTAACTTAAC TGATGAAGAT
GGCAACCCAC TTGGCGTCCA GTGGACACAA TTTCGCTTTG CTGCTGCGCC GCCAACGGGC
GAAGATGACG TGAAGAAAAC CGAATGGCAA ACTCAACAAA TCTTCATGGC GCACAGCGCT
GTCACGACAA CCGACAAACA CTATGCAGAT GAAAAATGGT CACGCGCTCA AGCGTCCTTA
GCCGGCGTCG ATAGCTCTCC ATTTCGTGTT TACCTCGATG ATTGGCAGTG GACCTCTTCA
ACCAACGACC TCTTCCCTGC CACGCTAAAT GCCAATTCAG AGCAGTTTGG CTACTCACTA
AAACTGACCA GCAGCGCACC TTATCAAAAG CAAGGCGAGC AAGGTTACAG CACCAAAAGT
GCCGATGGTC AGGTGGCTTC GTATTACTAC AGCCAACCGT TTATTGATGT CTCCGGTGAA
GTCACCATCG AAGGCGAAAC TCATCAAGTG TCGGGTGAAG GCTGGATAGA TCGAGAGTGG
AGCTCGCAAT TCTTACTCGA CTCACAACAA GGCTGGGACT GGTTTGCTCT GAGGTTGAGT
GACAAAACCA GCTTGGTGGT GTTCCAGTTG CGGGATTCCA AAACCGGACA AGCCAGTTAC
TCCAGCGCAA AGCTGATGCA GCAAGATGGT TCTGGCATCG CTATCCCACA AAAAGACATT
CAGTTAAAGG CAACCAATCA AACAGAAATC CAAGGGCGAA AGTATCCAAC CCAGTGGCAA
GTGTCGATTC CAAATCAGCA AATTGAGCTT ACCGTTTCTG CTCTCAACCC GAACGCGAAA
ATGCCGCTTT CTGTGCCTTA TTGGGAAGGC CCAGTACGTA TTGAGGGCTC TCATTCTGGG
ACTGGCTACA TGGAACTCAC TGGCTATTAG
 
Protein sequence
MVRLASKVTL LISSLFLFGC EDPQQKNMGT LLGSGDTQSE SKLFTPVEKG VELTFPTDHQ 
AHPNFRHEWW YLTANLTDED GNPLGVQWTQ FRFAAAPPTG EDDVKKTEWQ TQQIFMAHSA
VTTTDKHYAD EKWSRAQASL AGVDSSPFRV YLDDWQWTSS TNDLFPATLN ANSEQFGYSL
KLTSSAPYQK QGEQGYSTKS ADGQVASYYY SQPFIDVSGE VTIEGETHQV SGEGWIDREW
SSQFLLDSQQ GWDWFALRLS DKTSLVVFQL RDSKTGQASY SSAKLMQQDG SGIAIPQKDI
QLKATNQTEI QGRKYPTQWQ VSIPNQQIEL TVSALNPNAK MPLSVPYWEG PVRIEGSHSG
TGYMELTGY