Gene VIBHAR_04749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04749 
Symbol 
ID5557763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp18497 
End bp19162 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content45% 
IMG OID640909228 
Producttranscriptional regulator 
Protein accessionYP_001446885 
Protein GI156975979 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTC GCCGTGATAT CGTAAAACTG GAATCCTCGG GTAAAGTCGT TTCTGTTTCT 
GGTGGAGTGC AACTGGCTCA GGCTTTACAT TCTGAGCTTT CCCATGACGC TAAAGTCGAG 
CAACAAGCGG ATGAGAAGGT TCAAATTGGC AAACTTGCTG CCACGTTAAT TGGCAAAGAC 
GCTACGATTT ACTTGGATGC GGGAACCACC TCTCTAGAGA TCGCCCACCA AATAGCGGAT 
CGTGACGATC TATTAGTGAT CACCAATGAC TTCTCTATTG CGGGTTTCCT GATGACGCAC 
AGTCAATGTG AGCTTTACCA TACCGGAGGC AAAATTGATC GTGAGAACCA ATCCACAGTT 
GGTGGAAAAG TCGCAGAGTT CTTGAACGGA TTGAACATTG ATATTGCCTT TATCTCTACG 
TCTTCTTGGA GTTTGAAGGG CTTATCAACG CCAAACGAAA ACAAAGTCCT TGTGAAAAAG 
GCCATCATCA AAGCGGCACA AACTAACTAC CTTGTTTCTG ACTCCACCAA ATACGGCCAA 
ATTGCCAGCT TTCATGCTTT AAATATCGAG CAATTAGACG GCATCATTAC CGATTCCAAT 
CTGTCTGACG TAGTAACACA AGAGCTGATA GACAAAGGGT TAAGTGTGAT TAGAGGCGAC 
CAATAA
 
Protein sequence
MTIRRDIVKL ESSGKVVSVS GGVQLAQALH SELSHDAKVE QQADEKVQIG KLAATLIGKD 
ATIYLDAGTT SLEIAHQIAD RDDLLVITND FSIAGFLMTH SQCELYHTGG KIDRENQSTV 
GGKVAEFLNG LNIDIAFIST SSWSLKGLST PNENKVLVKK AIIKAAQTNY LVSDSTKYGQ 
IASFHALNIE QLDGIITDSN LSDVVTQELI DKGLSVIRGD Q