| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03694 |
|---|
| Symbol | |
|---|
| ID | 5555102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3729519 |
|---|
| End bp | 3730742 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640909173 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446835 |
|---|
| Protein GI | 156975928 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1459] Type II secretory pathway, component PulF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACTT TTCGTTATCA AGGCCGCACC TTAGACGGCT CATCAACCAG TGGCAAAGTC
GATGCGGTGA ATTCCGAAGC GGCAGCGGAA GCATTGATGA ATAAGGGGAT TATTCCTCTA
AACCTGCGTT TAGAAAAAGA AGCGGTCAAA AGCAAAGTCA GCTTATCCAA GTTACTTGTG
CCTGCGATTC CGCTTGAAGT GATTATTCTG TTTTCACGTC AGCTCTTTAG CTTGACCAAA
GCCGGCGTGC CATTGCTGCG CTCCATGCGT GGCCTGCTGC AAAACTGCGA AAACAAGCAA
CTTAAGGAAG CGCTTGAAGA AGTTGTAGCG GAATTGAGTA ACGGTCGCGG TCTTTCCTCC
GCGATGCAAC CACATACCAA AGTGTTTAGC CCGTTGTTCG TTTCGATGAT CAACGTGGGT
GAAAATACAG GTCGCCTCGA CCAAGCCTTG CTACAGCTAG CAAACTATTA CGAACAAGAG
CTGGAAACGC GTAAACGCAT TAAAGCAGCC ATGCGCTATC CAACTTTTGT CATCGTGTTT
ATCACCATCG CGATGTTTAT TTTGAACATT CTGGTTATCC CAGAGTTTGC CTCCATGTTT
ACGCGCTTTG GTGTTGAGTT ACCGCTGCCT ACCAGAATTT TGATCGCAAC GTCGAGCTTC
TTTGTGAATT ATTGGGGCTT ACTGATTGCC GCGATCATTG GTGCGTTTGT TATTTTCAGA
TCTTGGGTCG CAACCGCGGA TGGTCGAGAA AAGTTCGACA AGCTGCGTTT AAGATTACCG
ATTGTGGGCG ACATAGTTAA CCGTGCGCAG CTATCGCGGT TCGCACGAAC GTTTTCACTC
ATGTTGAAAT CTGGTGTACC GCTAAACCAA TCATTGGCTC TGGCTGGTGA AGCTCTGGGT
AATAAGTTCT TGGAAAATCG AATTTTAGAA ATGAAAGCGG CCATTGAAGC GGGCAGTACC
ATTTCAGTTA CCGCAATCAA CAGTAAGATT TTTACGCCTC TGGTTATTCA GATGATTGCG
GTCGGTGAAG AAACGGGTCG TATTGATGAA CTGCTGTTGG AAGTCTCAGA CTTCTATGAC
CGCGAAGTGG ATTACGACTT AAAAACCCTA ACTGCACGAA TAGAACCGTT ACTTTTGGTC
ATTGTAGCAG GCATGGTTAT GGTGTTGGCA CTCGGTATCT TCCTGCCAAT GTGGGGGATG
CTGGACATCA TCAAAGGCGG CTAA
|
|---|
| Protein sequence | MPTFRYQGRT LDGSSTSGKV DAVNSEAAAE ALMNKGIIPL NLRLEKEAVK SKVSLSKLLV
PAIPLEVIIL FSRQLFSLTK AGVPLLRSMR GLLQNCENKQ LKEALEEVVA ELSNGRGLSS
AMQPHTKVFS PLFVSMINVG ENTGRLDQAL LQLANYYEQE LETRKRIKAA MRYPTFVIVF
ITIAMFILNI LVIPEFASMF TRFGVELPLP TRILIATSSF FVNYWGLLIA AIIGAFVIFR
SWVATADGRE KFDKLRLRLP IVGDIVNRAQ LSRFARTFSL MLKSGVPLNQ SLALAGEALG
NKFLENRILE MKAAIEAGST ISVTAINSKI FTPLVIQMIA VGEETGRIDE LLLEVSDFYD
REVDYDLKTL TARIEPLLLV IVAGMVMVLA LGIFLPMWGM LDIIKGG
|
|---|
| |