Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03584 |
Symbol | |
ID | 5556251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3630491 |
End bp | 3631663 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640909064 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001446746 |
Protein GI | 156975839 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACGC CCCCAGCACT GAGCTTGTAT GTACACATCC CGTGGTGTGT ACAAAAGTGC CCGTATTGCG ACTTTAACTC TCACGCGCTC AAAGCCGAAA TCCCAGAAGA AGAGTACATC AATGCCCTTC TTGAAGACTT GGATACTGAC ATTGAGAAAT ACCGTCTTAA CGAAGCGCCA CGTCCACTGC ATTCAATCTT CATTGGTGGT GGTACGCCAA GTTTGATTTC GGCAGAAGGC ATCGAGCGTC TGCTTAAAGG TATTGAAGCG CGTATTCCGT TCAAGCCTGA AATCGAAATC ACCATGGAAG CTAACCCAGG CACCATTGAA GCAGAGCGTT TTGTTGGCTA CCGCAAGGCT GGTGTAACGC GAATCTCTAT CGGCGTGCAA AGCTTTGAAC AACAGAAGCT GGAGCGTTTG GGGCGTATTC ACGGTCAAGA CGAAGCCGTC AATGCTGCTA AGCTGGCGCA CCAAATCGGT TTGAACAGCT TTAACCTCGA TCTCATGCAC GGTTTACCAG ATCAAAGCAT CGAACAAGCC TTAGCAGATT TGGACAAAGC GATTGAGTTG GCGCCGCCGC ACTTGTCTTG GTATCAGCTG ACCATCGAAC CAAACACCAT GTTCTACTAC AAGCCACCGA CTCTGCCTGA TGACGATGAC TTGTGGGATA TCTTCGAGCA AGGACATGAG AAACTCGCAG CGGCAGGTTA CGTTCAATAC GAGATTTCTG GTTACAGCAA GCCGGGCTAT CAGTGCCAGC ACAACCTGAA CTATTGGCGC TTTGGTGACT ACCTTGGCAT TGGTTGCGGC TCACACGGTA AGCTGAGCTT TGCTGATGGT CGCATCGTTC GTACCACTAA GGTCAAGCAT CCACGCGGCT ATCTGATGGC ATACCAAAAC ATGGTAAAGC CGTACTTGGA TAGTGAACAG CTTGTGGCTG ATGAAGATCG TCCGTTTGAG TTCTTTATGA ACCGTTTCCG CTTAATGGAG GCGTGCCCGA AACAAGACTA CATCGATACG ACAGGTCTGC CGTTGAGCTC AATTCAAGAG ACTATCGATT GGGCGCTTGA AATGGGTTAC CTGAGTGAAA CAGAGACTCA CTGGCAAATT ACCGAGAAAG GTAAGCTGTT CCTCAATGAC TTGCTTGAAG CCTTTATGGC GGAAGAGGAA TAA
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Protein sequence | MLTPPALSLY VHIPWCVQKC PYCDFNSHAL KAEIPEEEYI NALLEDLDTD IEKYRLNEAP RPLHSIFIGG GTPSLISAEG IERLLKGIEA RIPFKPEIEI TMEANPGTIE AERFVGYRKA GVTRISIGVQ SFEQQKLERL GRIHGQDEAV NAAKLAHQIG LNSFNLDLMH GLPDQSIEQA LADLDKAIEL APPHLSWYQL TIEPNTMFYY KPPTLPDDDD LWDIFEQGHE KLAAAGYVQY EISGYSKPGY QCQHNLNYWR FGDYLGIGCG SHGKLSFADG RIVRTTKVKH PRGYLMAYQN MVKPYLDSEQ LVADEDRPFE FFMNRFRLME ACPKQDYIDT TGLPLSSIQE TIDWALEMGY LSETETHWQI TEKGKLFLND LLEAFMAEEE
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