Gene VIBHAR_03541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03541 
Symbol 
ID5556368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3593464 
End bp3594102 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content48% 
IMG OID640909021 
Productnegative regulator of sigma E activity 
Protein accessionYP_001446704 
Protein GI156975797 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAAA TAATGGCTGA CAAAGAAAAA CTTTCAGCTC TCATGGATGG AGAATTGGTC 
GATAAGGCTT TAATTCAAGA ATTAGAGCAA GACCAAGAGA GCCGTGATGC TTGGCAGAAC 
TATCACCTAA TTGGTGATGT GATGCGAGGC GAAGCGCCAG CAAAGCCTGA GTGGAATATT 
GCTGAAAGCG TAGCGTTAGC GTTAGAAGAC GAGCCAGTGC ATCGTGCTAT CGATTCGCGC 
AGTGCTAACG TAATTTCAAT TAACGACGCG CCAAAAGAGT CGCAACCAGA GCCACAAAAA 
GCGAAACGCC AGTTGCCTGC ATGGTTAACT CAATTTGGTC AAGTAGCCGT TGCTGCGTGT 
GTGTCACTTG CTGTGATACT AGGCGTACAG CAGTATGGTG GTAGCGACCC AATGTCGCCG 
CAAGCAGACC AACTTCCTGT ACTTCAGACT GTGCCATTCG CGGGCAGTGC TGAACCAGTA 
AGCTTGACGC GTGAATCCGT AGAGCGTTCA GTTGGTGAAG CAAATATGCA AGAGCAACGC 
AAACGCGTTC ATGCTATGCT TCGTGACTAC GAATTGCAGC TAAGAATTAA CAGTGATGCG 
TCTCAGCAAG ATGCACATCT GACTCCGGAT ATTGAATGA
 
Protein sequence
MVKIMADKEK LSALMDGELV DKALIQELEQ DQESRDAWQN YHLIGDVMRG EAPAKPEWNI 
AESVALALED EPVHRAIDSR SANVISINDA PKESQPEPQK AKRQLPAWLT QFGQVAVAAC 
VSLAVILGVQ QYGGSDPMSP QADQLPVLQT VPFAGSAEPV SLTRESVERS VGEANMQEQR 
KRVHAMLRDY ELQLRINSDA SQQDAHLTPD IE