Gene VIBHAR_03493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03493 
Symbol 
ID5554262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3549146 
End bp3549787 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID640908973 
Producthypothetical protein 
Protein accessionYP_001446665 
Protein GI156975758 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACCA AGCATCTTCT CCTTCTAGCA GAGAATAATC TTCAAACCAG TTTAATAGAG 
GGGCAATTAT CAATCGCACC TGATGTAAAA GTCAGAACGT GTTTACCAGA AGAGGCCGTC 
TTTCGCATTC ATACCATGAG CATCGATCTT GTGCTTATTG ACTATGACTT TATGAGGCGA 
CTTGAATCCA GAGGTTTGCT CCCGGATTTT GATTTATTCG GTTGGCCGCT AATGATTCAC 
AACGTACCAA GCGAGAGCGT TGAAAATGAA TTGTTGCGAT GGAAGCTACT TAAAGGCATT 
TTGCTACAAA GTGCTTCTGT GTCCCACATA AGTGAGAGTG TGGAATATAT ATTTCAAGGA 
GGATTGTGGT TACCAAGGGT GTATTTAGAA ACGTTAATCA ACAACTACCG ACACTCGAAT 
GTTTCGATGG AATGCCAACA TGATTCGCTA ACCAGTCGTG AGAGGCAAAT TTTAGAGTTG 
CTGGCTTATG GAATATCAAA CCAGCAGATC GCTTCACAGT TGTTTTTGTC AGAGAGTACG 
GTGAAAAGCC ATATCTATAA GTTGTACAAG AAACTGGATG TACATTGCCG TCATGATGCT 
ATCAAGATAG TGCGGATGAA CGGGGGGTTA ACCGCACAAT AA
 
Protein sequence
MGTKHLLLLA ENNLQTSLIE GQLSIAPDVK VRTCLPEEAV FRIHTMSIDL VLIDYDFMRR 
LESRGLLPDF DLFGWPLMIH NVPSESVENE LLRWKLLKGI LLQSASVSHI SESVEYIFQG 
GLWLPRVYLE TLINNYRHSN VSMECQHDSL TSRERQILEL LAYGISNQQI ASQLFLSEST 
VKSHIYKLYK KLDVHCRHDA IKIVRMNGGL TAQ