| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03469 |
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| Symbol | |
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| ID | 5553984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 3522912 |
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| End bp | 3524597 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640908949 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446641 |
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| Protein GI | 156975734 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAACCA ACCTCTCAAC GGTTCTTCGC CAAGCAGGAA TACTGACTTT TTCCCAAGAG
GAATCGTTAC TTGAGCAAGC AAAAGCTTCT GGCATTTCGA TGCCGGAGGC TTTGCTCAGT
TCTGGCTTTT TCCAATCTCA CGAATTGACA GAACACCTAA GCTCAGTATT CGGGCTTTCT
TGCACTTCTC TTAACCAATA CGAATACGCT TCGCTATGCC AAACGCTTGG CTTACGCGAT
CTCATCACTC GCCATAACGC TTTACCGCTT AACCGCACCT CTTCAACTTT GATTCTCGCG
GTAGCAGATC CAACCAACCT TCAAGCCGAA GATGACTTTC GTTTTGCGAC AGGCTTGCAA
GTCGAGCTTG TCCTCGCTGA CTTTCGTGAG CTAACAGCAG CCATTCGACG TTTATATGGC
CGATCGCTTG GGCAAGAAAA ATCCGGTCTT AAAGAAATCA ACCAAGATGA ACTGGCGGGT
TTGGTTGATA TTGGTGAGGA TGAAATTGAG AACATCGAAG ATCTCAGCCA AGATGAATCG
CCGGTCAGTC GCTATATCAA CCAAATTTTA CTCGATGCTG TCCGTAAAGG GGCTTCAGAT
ATTCATTTCG AACCCTACGA AAACATGTAT CGAGTCCGTT TACGCTGCGA TGGCATCTTG
ATTGAAATTC AACAGCCACC TAGCCACTTA AGCCGTCGAC TTTCCGCACG TATAAAAATC
CTATCTAAAC TCGATATTGC TGAGCGCCGT TTGCCACAGG ATGGGCGAAT CAAGCTCAAA
TTAAACCAAG ACACTGCAAT TGATATGCGT GTCTCCACAC TACCAACTCT TTTTGGGGAA
AAGATTGTTC TGCGTTTGCT CGACAGCAGT TCTGCAGCAT TAGATATCAA TAAGCTAGGT
TATAGCGACT CACAGAAACA ACTTTATTTG GATGCCCTGC GCCGTCCGCA AGGTATGATC
CTGATGACAG GCCCAACAGG TAGCGGTAAA ACGGTCTCGC TCTATACTGG ATTGAGTATT
CTTAATAAGC CAGAGATCAA TATCTCAACC GCTGAAGATC CCGTTGAGAT TAACCTGCCC
GGCATTAACC AAGTTCAAGT TCAGCCAAAG ATCGGCTTTG GTTTTGCAGA AGCGCTCCGC
TCTTTCTTAC GTCAAGACCC TGATGTCGTC ATGGTGGGCG AGATCCGAGA TCTCGACACA
GCAGAAATCG CGATCAAAGC ATCACAGACT GGCCACTTAG TTCTCTCCAC TTTACACACA
AACTCAGCTG CCGAGACTGT TATTCGCTTG TCTAATATGG GCGTAGAAAG CTTTAACCTC
GCCTCTTCTC TCAGTTTGAT CATCGCCCAG CGTTTGGCTA GAAAACTTTG TCCATATTGT
AGACAACCTC AAGAGCCAAA CAACCAACTT CAACATATTG GAATCACCAG CACCGAACAG
ATCTTTCAAG CTAATCCCGA CGGTTGTAAC GAGTGTACCC ATGGTTATTC AGGGCGAACC
GGCATTTACG AAGTGATGAA GTTTGATGAA TCCCTTTCAG AAGCACTCAT CAAAGGCGCC
TCGGTACACG AATTAGAAAA ACTCGCCATT GCCAATGGTA TGCAAACCTT ACAAATGTCT
GGCATCGAAA AACTCAAACA AGGCATTACC AGCTTCAGCG AATTGCAGCG CGTTCTCTAC
TTCTAA
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| Protein sequence | MLTNLSTVLR QAGILTFSQE ESLLEQAKAS GISMPEALLS SGFFQSHELT EHLSSVFGLS
CTSLNQYEYA SLCQTLGLRD LITRHNALPL NRTSSTLILA VADPTNLQAE DDFRFATGLQ
VELVLADFRE LTAAIRRLYG RSLGQEKSGL KEINQDELAG LVDIGEDEIE NIEDLSQDES
PVSRYINQIL LDAVRKGASD IHFEPYENMY RVRLRCDGIL IEIQQPPSHL SRRLSARIKI
LSKLDIAERR LPQDGRIKLK LNQDTAIDMR VSTLPTLFGE KIVLRLLDSS SAALDINKLG
YSDSQKQLYL DALRRPQGMI LMTGPTGSGK TVSLYTGLSI LNKPEINIST AEDPVEINLP
GINQVQVQPK IGFGFAEALR SFLRQDPDVV MVGEIRDLDT AEIAIKASQT GHLVLSTLHT
NSAAETVIRL SNMGVESFNL ASSLSLIIAQ RLARKLCPYC RQPQEPNNQL QHIGITSTEQ
IFQANPDGCN ECTHGYSGRT GIYEVMKFDE SLSEALIKGA SVHELEKLAI ANGMQTLQMS
GIEKLKQGIT SFSELQRVLY F
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