Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03431 |
Symbol | |
ID | 5553427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3476240 |
End bp | 3478648 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908911 |
Product | hypothetical protein |
Protein accession | YP_001446603 |
Protein GI | 156975696 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3459] Cellobiose phosphorylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATACG GCTATTTCGA TAACGAGAAT CGCGAATACG TCATCACTCG CCCTGACGTA CCAGCACCAT GGACAAACTA CCTAGGTACT GAGAAGTTCT GTACGGTTAT CTCGCACAAC GCGGGTGGCT ACTCGTTCTA CAACTCTCCA GAATACAACC GTGTTACTAA ATTCCGTCCA AATGCGACAT TCGATCGCCC AGGACACTAC GTTTACCTAC GTGATGATGA GACAGGTGAT TACTGGTCAA TCTCTTGGCA ACCAGTTGCG AAAAGCCTAG ACGAAGCAAA CTACGAAGTT CGTCACGGCT TGTCTTACTC TAAGTTCAAG TGTGAATACA GCGGCATTAC CGCAACAAAA ACTCTGTTCG TGCCAAAAGG CGAAGACGCT GAAATCTGGG ATGTAGTGAT TAAAAACACC TCAGATAAAC CACGTACGAT CAGCGCATTC TCATTTGTGG AGTTCTCATT CAGCCACATT CAATCTGATA ACCAGAACCA TCAGATGTCT CTGTACTCTG CTGGTACGTC ATACAACGAA GGCGTAATTG AGTACGACCT GTACTACAAC ACCAACGATT TCGAAGGTTT CTACTACCTA GCTTCAACAT TTGACCCAGA TTCATACGAC GGTCAACGTG ACAGCTTCCT TGGCCTATAC CGTGACGAAG CAAACCCGCT AGCGGTAGAA CAAGGTAAGT GTTTCAACAC AGCACAAACG TGTTACAACC ACTGTGGCTC TCTGCACAAG CAATTCACTA TCCAGCCGGG TGAAGAAGTG CGCTTTGCTT ACATTCTAGG TATCGGTAAA GGCAATGGTG ACCGTCTACG TGCTAAATAC CAAGACCTTG CAGAAGTCGA CAACGCATTT GCAGGCATCA AAACACACTG GGATGAGCGT TGTGGCAAGT TCCAAGTGAA ATCGCCAAAC GAAGGTCTAG ACACCATGAT CAACGCTTGG ACACTGTACC AAGCAGAAAC TTGTGTGGTG TGGTCTCGCT TTGCTTCATT CATCGAAGTG GGTGGTCGTA CTGGTCTGGG TTACCGCGAT ACAGCGCAAG ATGCGATCTC AGTTCCTCAT GCTAACCCTG CAATGACGCG TAAACGTATC GTTGACCTAC TGCGCGGCCA AGTGAAAGCG GGTTACGGTC TACACCTATT TGATCCAGAT TGGTTCGATC CAGAAAAAGC TGACGTTAAA CCATCGAAAT CACCAACAGT TGTTCCTACT CCGTCTGATG AAGACAAGAT TCACGGTATC GAAGACACGT GTTCTGATGA CCACCTATGG CTAGTCCCAA CCATCTGTAA GTACGTAATG GAAACGGGTG AGCATAGCTT CTTCGACGAA GTGATCCCTT ACGCAGATGG CGGCGATGCA AGCGTTTATG ACCACATGAA AGCAGCGCTA GACTTCTCTG CGGAGTACGT GGGTCAAACC GGTATCTGTA AAGGTCTGCG TGCGGACTGG AACGACTGTC TAAACCTAGG TGGTGGTGAA TCTTCAATGG TGTCGTTCCT GCACTTCTGG GCACTTCAAG AGTTCATCGA CCTAGCAAAA TACCTAGGTA AAGAAGCCGA CGTTGAGAAA TACACGGAAA TGGCAGCAAA CGTTCGTGAA GCGTGTGAAA CACACCTTTG GGATGATGAA GGCGGTTGGT ACATCCGTGG CCTGACGAAG AATGGCGACA AGATCGGTAC AGCGCAACAA GCGGAAGGCC GAGTACACCT TGAGTCAAAC ACGCTTGCAG TACTTTCTGG TGCGGTATCT CAAGAGCGCG GCGAAAAAGC GATGGACGCG GTCGACGAGA ACCTGTTCTC TGAATACGGC CTTCACCTAA ACTCACCATC TTTTGCAACA CCAAATGATG ACATCGGCTT CGTAACTCGC GTTTACCAAG GCGTAAAAGA GAACGGTGCA ATCTTCTCGC ATCCAAACCC ATGGGCTTGG GTAGCTGAAG CGAAACTGGG TCGTGGTGAC CGTGCAATGA AATTCTACGA TGCACTAAAC CCATACAACC AGAACGACAT CATCGAAAAA CGTATTGCAG AACCATACTC ATACGTGCAG TTCATCATGG GTCGTGACCA CCAAGACCAC GGTCGTGCAA ACCACCCATG GTTAACAGGT ACATCTGGCT GGGCTTACTT CGCTGTTACC AACTTTATCC TTGGTGTACG TACAGGATTC GATGGCCTGA CTATCGATCC ATGTATCCCA ACTAACTGGC CTGGTTTCGA AGTGACTCGT CAATGGCTAG GTGCAACGTA CAACATCAAA GTGGTTAACC CTGATTCAGT AAGCAAAGGC GTTAAGTCAA TTACTGTGAA CGGTGAAGCA GTAAATGGTG CATCTGTACC AGTTCAAGCG GAAGGTTCAG TAAACGAAGT TATCGTTACT CTAGGTTAA
|
Protein sequence | MKYGYFDNEN REYVITRPDV PAPWTNYLGT EKFCTVISHN AGGYSFYNSP EYNRVTKFRP NATFDRPGHY VYLRDDETGD YWSISWQPVA KSLDEANYEV RHGLSYSKFK CEYSGITATK TLFVPKGEDA EIWDVVIKNT SDKPRTISAF SFVEFSFSHI QSDNQNHQMS LYSAGTSYNE GVIEYDLYYN TNDFEGFYYL ASTFDPDSYD GQRDSFLGLY RDEANPLAVE QGKCFNTAQT CYNHCGSLHK QFTIQPGEEV RFAYILGIGK GNGDRLRAKY QDLAEVDNAF AGIKTHWDER CGKFQVKSPN EGLDTMINAW TLYQAETCVV WSRFASFIEV GGRTGLGYRD TAQDAISVPH ANPAMTRKRI VDLLRGQVKA GYGLHLFDPD WFDPEKADVK PSKSPTVVPT PSDEDKIHGI EDTCSDDHLW LVPTICKYVM ETGEHSFFDE VIPYADGGDA SVYDHMKAAL DFSAEYVGQT GICKGLRADW NDCLNLGGGE SSMVSFLHFW ALQEFIDLAK YLGKEADVEK YTEMAANVRE ACETHLWDDE GGWYIRGLTK NGDKIGTAQQ AEGRVHLESN TLAVLSGAVS QERGEKAMDA VDENLFSEYG LHLNSPSFAT PNDDIGFVTR VYQGVKENGA IFSHPNPWAW VAEAKLGRGD RAMKFYDALN PYNQNDIIEK RIAEPYSYVQ FIMGRDHQDH GRANHPWLTG TSGWAYFAVT NFILGVRTGF DGLTIDPCIP TNWPGFEVTR QWLGATYNIK VVNPDSVSKG VKSITVNGEA VNGASVPVQA EGSVNEVIVT LG
|
| |