Gene VIBHAR_03421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03421 
Symbol 
ID5553684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3460163 
End bp3461188 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content43% 
IMG OID640908901 
Product16S rRNA m2G 1207 methyltransferase 
Protein accessionYP_001446593 
Protein GI156975686 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTT ATATCGCTCC TAGCCAAATA GCTCAGCGCC AACTTGAATA CTTCAACGGC 
AAACACGTTT TAGTTGCTGG AGAAGTTGAA GACCTGTTCC CTCTTGAGTT AGTAGCTCAT 
TGTGAGTCTG TTGAAGTATT TACTTCTAAC TACAGCTACT ACCGTCAAAT TCGCACATCG 
GACAAAGTGA AGAGTCACTT TGGTTCAGAG TTTGATATTG AGACTCAAGC AGACATGGTG 
CTTTTATACT GGCCAAAAGC CAAGGCGGAA GCAGAATACT TACTGGCAAT GTTGATGACT 
AAGTTAGGCA TCAATACAGA AATCGTCGTC GTTGGTGAGA ACCGCTCAGG CATCAAGAGC 
ATTGAGAAGA TGTTCAAAGA ATACGGCCCG GTTAAAAAAT ACGACTCTGC TCGTCGCTGT 
TCATTTTACT GGGGCACTTG CCTTAACGAA CCAAAACCGT TCAATCAAGC CGACTGGTTT 
AAATCTTACG AAATTACACT CGGTGAACAA TCACTTACCG TTAAGAGTCT ACCTGGTGTA 
TTTAGCCATG GTGAATTTGA CCTAGGCAGT CGTCTTCTGC TTGAAACCTT ACCTAAGCTT 
TCAGGCAAGG TACTCGACTT TGGTTGTGGT GCTGGTGTAC TGGGCGCATT TATGGCTAAA 
GCAAACCCAG AGATCGCGAT TGAGATGTGT GATATTAACG CTTATGCCAT TACCTCTAGC 
CAAGCAACAC TCGAGGCGAA TGGGTTATCA GGTCGAGTTT TTGCCTCAGA TATCTACTCA 
GACACGGCTA AAGACTACCG TTTTATTGTC AGTAACCCAC CATTTCACAG TGGCTTAGAC 
ACCAACTACA ACGCAGCAGA AACTCTGTTA GGTCAAGCAC CAAAGTACAT GACGGCCAAC 
GGTGAAATGA TCATTGTAGC GAACAGTTTC TTGCAGTATC CGCCAATTAT TGAGAAAGCC 
TTCAATAATT GCGAGACGCT AAATAAGACT AACAAATTCT CTATCTACTA CGCGAAAAAA 
TCCTAA
 
Protein sequence
MSAYIAPSQI AQRQLEYFNG KHVLVAGEVE DLFPLELVAH CESVEVFTSN YSYYRQIRTS 
DKVKSHFGSE FDIETQADMV LLYWPKAKAE AEYLLAMLMT KLGINTEIVV VGENRSGIKS 
IEKMFKEYGP VKKYDSARRC SFYWGTCLNE PKPFNQADWF KSYEITLGEQ SLTVKSLPGV 
FSHGEFDLGS RLLLETLPKL SGKVLDFGCG AGVLGAFMAK ANPEIAIEMC DINAYAITSS 
QATLEANGLS GRVFASDIYS DTAKDYRFIV SNPPFHSGLD TNYNAAETLL GQAPKYMTAN 
GEMIIVANSF LQYPPIIEKA FNNCETLNKT NKFSIYYAKK S