Gene VIBHAR_03420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03420 
Symbol 
ID5553635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3459001 
End bp3460086 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content45% 
IMG OID640908900 
Producthypothetical protein 
Protein accessionYP_001446592 
Protein GI156975685 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAATA ATGTAAAAAT CACGTCGAGT CATCGAGTGC TAGTTGTTGC GCTGCTCGCC 
GCTGCTTTTG CCTGCTATTT ATTGGTCGAG CCTTACATCA ACTCGATCGT AATGGCGTTT 
ATTATTTCTC TACTCATGTT CCCAATACAT GAGTGGTTTG AACGAAAACT GCCAAACCAC 
AAAAACTTGG TTTCACTGCT CTCTTGTGTG GTTCTCACCT TTATTATTGT GATTCCATTA 
TTGTTTGTAT TTGCTGCTAT CGTGCAGCAA GGGTCGGTAT TTTCGCAAAA CACCTACAAG 
TGGGTAAGCA ATGGTGGTAT CCAAGATATC TTCCAACACC CTTGGGTTGT CAAAGGGTTA 
GCACTGGTTA ATGAGTACTT ACCTTTCGAC AAAATCGAAC CACAAGCCAT CGCTGAGAAA 
ATTGGCCAAT TCGCCACATC ATTTGGTTCA AACCTTGTTG CTATCAGTGC CAAAATCCTA 
GGGGATGCAA CCAACTTCCT GATGGACTTC TTCCTGATGT TGTTCGTGTT GTTCTTCCTA 
TTGCGTGACC ACGACAAGAT CATCTCAGCG ATGCGACATA TTCTGCCGCT CTCTCGCAGC 
CAAGAAGATA AGATCCTGAC CGAGATTGAA CAGGTCTCGA AATCAGCTGT AATGGGGTCA 
TTCTTAACCG CGATTGCTCA AGGCTTTGCT GGTGGTATCG GTATGTGGCT TGCAGGTTTC 
CCTGGCTTGT TCTGGGGCAC TATGATGGGC TTTGCGTCAT TTATCCCTGT AGTTGGCACG 
GCGCTAATTT GGATTCCAGC TGCCGCTTAC TTGTTCCTAA CTGGCGACAC AACTTGGGCT 
ATATTCCTAA CAGTGTGGAG TGTTCTCGTA GTTGGCTCGA TCGATAACCT GCTGCGCCCA 
TTGCTGATGC AAGGTAGTGC AGGCATGAAT ACGCTCATGA TCTTCTTCTC GCTGTTAGGT 
GGTCTGCATC TATTTGGTTT GATTGGCCTT ATTTACGGTC CACTGATCTT TGCCGTGACA 
ATGGTGCTAT TCAATATCTA CGAAGAGGAG TTTAAAGACT TCCTCAATCA ACAAGACAAT 
AGCTAA
 
Protein sequence
MPNNVKITSS HRVLVVALLA AAFACYLLVE PYINSIVMAF IISLLMFPIH EWFERKLPNH 
KNLVSLLSCV VLTFIIVIPL LFVFAAIVQQ GSVFSQNTYK WVSNGGIQDI FQHPWVVKGL 
ALVNEYLPFD KIEPQAIAEK IGQFATSFGS NLVAISAKIL GDATNFLMDF FLMLFVLFFL 
LRDHDKIISA MRHILPLSRS QEDKILTEIE QVSKSAVMGS FLTAIAQGFA GGIGMWLAGF 
PGLFWGTMMG FASFIPVVGT ALIWIPAAAY LFLTGDTTWA IFLTVWSVLV VGSIDNLLRP 
LLMQGSAGMN TLMIFFSLLG GLHLFGLIGL IYGPLIFAVT MVLFNIYEEE FKDFLNQQDN 
S