| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03393 |
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| Symbol | |
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| ID | 5553360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3429379 |
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| End bp | 3431511 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640908873 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001446567 |
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| Protein GI | 156975660 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAAA AACCAGTTGT TAAAACGTTC CAGTACGGTA ACCACACAGT TACTCTAGAA
ACTGGCGTTA TCGCACGTCA AGCTACGGCT GCAGTAATGG TTACTATGGA CGATACAGCA
GTATTCGTTT CTGTAGTCGG TAAAAAAGAA GCGGTTGAAG GTCAAGACTT CTTCCCTCTA
ACAGTTAACT ACCAAGAGCG TACTTACGCA GCAGGTAAAA TCCCAGGTGG TTTCTTCAAG
CGTGAAGGTC GTCCTTCTGA AGGTGAAACG CTAACGGCTC GTCTAATCGA CCGTCCAATC
CGTCCACTAT TCCCAGATGC ATTCAAAAAC GAAGTACAAG TTATTGCAAC AGTAGTATCT
GTGAACCCAG ACGTTCAACC AGACATCCCA ACAATGATTG GTACGTCTGC TGCGCTAGCT
ATCTCTGGTA TTCCGTTCAA CGGTCCTATC GGTGCTGCGC GTGTTGGTCA CATCGACGGT
CAACTAGTAC TTAACCCAAG CAACACTGAA CTAGAAGCAT CTAAGCTAGA CCTAGTTGTT
GCGGGTACTG AATCTGCAGT ACTAATGGTT GAATCAGAAG CTGACAACCT AACTGAAGAA
GAAATGCTAT CTGCTGTTGT ATTCGGTCAC GATCAACAAC AAGCTGTGAT CAAAGCAATC
AACGAATTCA AAGCTGAAGT TGCTACTCCT GCTTGGGATT GGGTTGCTCC AGCAGAGAAC
ACTGCGCTGG TAACTAAGAT TGCTGAACTT GCTGAAGCAA AACTGGTTGA AGCTTACCAA
ATCACTGAGA AGATGGCTCG TTACGACCGC ATCCACGAGA TCGCTGGTGA AGTTAACGAA
GTGCTGCTTG CTGAAGATCC AGAAGCAAAC ACAAAAGAAA TCCACACTAT CTTCCACGAT
CTAGAGAAGA CAGTGGTACG TCGCAGCATC ATCGCTGGTA ACCCACGTAT CGACGGTCGT
GAAAAAGACA TGGTTCGTGC GCTTGACGTA CGTACTGGTG TTCTTCCTCG TACTCACGGT
TCTTCACTAT TTACTCGTGG TGAAACTCAG GCGCTAGTAA CTGCGACTCT AGGTACGCAG
CGTGACGCTC AAATCATTGA TGAGCTAACA GGTGAGCGTA AAGATCACTT CCTACTGCAC
TACAACTTCC CTCCATACTG TGTTGGTGAA ACTGGTTTTG TAGGTTCTCC TAAGCGTCGT
GAAATCGGTC ACGGTAAACT GGCTAAACGC GGTATCGCAG CAGTAATGCC TTCTGTTGAT
GAGTTCCCAT ACACAGTACG TGTTGTATCG GAAATCACTG AATCTAACGG TTCTTCTTCA
ATGGCTTCTG TATGTGGTAC TTCTCTTGCT CTTATGGACG CAGGTGTGCC AATCAAGTCT
TCTGTTGCGG GTATCGCAAT GGGTCTTGTT AAAGAAGGCG ACGACTTCGT TGTTCTTTCT
GACATCCTTG GTGACGAAGA CCACCTAGGT GACATGGACT TTAAAGTAGC AGGTACTAAC
ACTGGTATCA CTGCACTTCA AATGGACATC AAGATCGAAG GTATCACTAA AGAGATCATG
CAAATTGCGC TTAACCAAGC TCAAGGTGCA CGTAAGCACA TCCTATCTGT AATGGATGAA
GCTATCTCTG GTGCTCGTGA AGACATCTCT GAATTCGCTC CTCGCATTCA CACAATGAAG
ATCAGCGCAG AGAAGATCAA AGACGTTATC GGTAAAGGTG GTGCAGTTAT CCGTGCTCTA
ACTGAAGAGA CTGGTACAAC TATCGAAATC GAAGACGACG GTACTATCAA GATTGCAGCA
ACTGAAGGTG CAGCAGCGAA AGAAGCTATC CGCCGTATCG AAGAGATCAC TGCTGAAGTT
GAAGTAGGTC GTATCTACAC TGGTAAAGTT GCACGTCTAG CTGACTTTGG TGCATTCGTA
ACGGTTCTTC CAGGTAAAGA TGGTCTAGTA CACATCTCTC AAATCGCTGA AAAACGCGTT
GAGAAAGTGT CTGACTACCT AACTGAAGGT CAAGAAGTTC AAGTTAAAGT TCTTGAAATT
GATCGTCAAG GCCGTGTACG TCTAAGTATG AAAGAAGCAG TAGAGAAGCC AGCAGAAGAA
GCAAACGACG CTTCTGAAGC AAAAGGCGAG TAA
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| Protein sequence | MFEKPVVKTF QYGNHTVTLE TGVIARQATA AVMVTMDDTA VFVSVVGKKE AVEGQDFFPL
TVNYQERTYA AGKIPGGFFK REGRPSEGET LTARLIDRPI RPLFPDAFKN EVQVIATVVS
VNPDVQPDIP TMIGTSAALA ISGIPFNGPI GAARVGHIDG QLVLNPSNTE LEASKLDLVV
AGTESAVLMV ESEADNLTEE EMLSAVVFGH DQQQAVIKAI NEFKAEVATP AWDWVAPAEN
TALVTKIAEL AEAKLVEAYQ ITEKMARYDR IHEIAGEVNE VLLAEDPEAN TKEIHTIFHD
LEKTVVRRSI IAGNPRIDGR EKDMVRALDV RTGVLPRTHG SSLFTRGETQ ALVTATLGTQ
RDAQIIDELT GERKDHFLLH YNFPPYCVGE TGFVGSPKRR EIGHGKLAKR GIAAVMPSVD
EFPYTVRVVS EITESNGSSS MASVCGTSLA LMDAGVPIKS SVAGIAMGLV KEGDDFVVLS
DILGDEDHLG DMDFKVAGTN TGITALQMDI KIEGITKEIM QIALNQAQGA RKHILSVMDE
AISGAREDIS EFAPRIHTMK ISAEKIKDVI GKGGAVIRAL TEETGTTIEI EDDGTIKIAA
TEGAAAKEAI RRIEEITAEV EVGRIYTGKV ARLADFGAFV TVLPGKDGLV HISQIAEKRV
EKVSDYLTEG QEVQVKVLEI DRQGRVRLSM KEAVEKPAEE ANDASEAKGE
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