Gene VIBHAR_03378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03378 
Symbol 
ID5553153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3415008 
End bp3416291 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content47% 
IMG OID640908858 
Producthypothetical protein 
Protein accessionYP_001446552 
Protein GI156975645 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGT TTATGAGCCT AGTCGGTATG GTAGTGCTTC TTGCTATTGC ATTTGCATTC 
TCATCTAACC GCAAAGCTAT CAACTTTAGA ACTGTGGGTG GCGCATTTGC TATCCAATTC
ATCCTTGGTG CATTTGTTCT TTACGTACCT TGGGGCCGTG ATCTACTAAA CGGTTTCTCC
ACTGGTGTTT CTAACGTTAT CAACTACGGT AACGATGGTT CATCTTTCCT ATTCGGTGGT
CTTGTTTCTG ACAAGATGTT CGAAGTATTC GGCGGCGGCG GCTTCATCTT CGCATTCCGC
GTTCTTCCTA CACTGATCTT CTTCTCTGCA CTGATTTCAG TTCTTTACTA CATTGGCGTA
ATGCAGTGGG TTATCAAGAT TCTTGGTGGT GCACTACAAA AAGCACTTGG CACTTCTCGT
GCGGAATCAA TGTCTGCAGC AGCTAACATT TTCGTAGGTC AAACTGAAGC ACCTCTAGTT
GTTCGCCCAT TCGTACCAAA AATGACTCAA TCTGAGCTAT TCGCGGTAAT GTGTGGTGGT
CTAGCATCTG TAGCTGGTGG TGTACTAGCA GGTTACGCTT CAATGGGTGT TCCTCTAGAG
TACCTAGTAG CAGCATCATT CATGGCAGCA CCGGGTGGTC TACTATTCGC TAAGATTCTT
CACCCAGAGA CTGACCAGCC TCACGAAGAC ATCGAAGAAG CAATGGACGG TGGTGACGAC
AAGCCAGCTA ACGTAATCGA CGCAGCAGCG GGCGGTGCGG CTTCTGGTCT ACAACTAGCA
CTAAACGTTG GTGCAATGCT AATCGCGTTC GTAGGTCTTA TTGCTCTTAT CAACGGTATG
CTAGGTGGCA TCGGTGGTTG GTTCGGTATG CCTGAACTAA CACTAGAACT TATCCTAGGC
TACGCGTTCT CTCCACTAGC ATTCCTAATC GGTGTTCCAT GGGACGAAGC AGTTGTTGCT
GGTTCATTCA TCGGTCAGAA ACTAGTAATC AACGAATTCG TTGCATACTT GAACTTCACA
CCTTACCTAG GTGAAGGCGC TCAAGTTGTT GCAGCTACTG GTGAAGTAAT GTCTGCTAAG
ACAACAGCTA TCATCTCATT CGCACTATGT GGCTTCGCGA ACCTTTCTTC TATCGCGATT
CTACTTGGTG GTCTAGGTAG CCTTGCACCA AACCGTCGTT CAGATATCGC TCGCATGGGT
ATTAAAGCTG TTCTTGCTGG TACGTTGTCT AACCTAATGG CAGCGACTAT CGCAGGCTTC
TGCCTTAGCC TTGCAGCACT TTAA
 
Protein sequence
MSLFMSLVGM VVLLAIAFAF SSNRKAINFR TVGGAFAIQF ILGAFVLYVP WGRDLLNGFS 
TGVSNVINYG NDGSSFLFGG LVSDKMFEVF GGGGFIFAFR VLPTLIFFSA LISVLYYIGV
MQWVIKILGG ALQKALGTSR AESMSAAANI FVGQTEAPLV VRPFVPKMTQ SELFAVMCGG
LASVAGGVLA GYASMGVPLE YLVAASFMAA PGGLLFAKIL HPETDQPHED IEEAMDGGDD
KPANVIDAAA GGAASGLQLA LNVGAMLIAF VGLIALINGM LGGIGGWFGM PELTLELILG
YAFSPLAFLI GVPWDEAVVA GSFIGQKLVI NEFVAYLNFT PYLGEGAQVV AATGEVMSAK
TTAIISFALC GFANLSSIAI LLGGLGSLAP NRRSDIARMG IKAVLAGTLS NLMAATIAGF
CLSLAAL