| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03376 |
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| Symbol | deoA |
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| ID | 5553277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3412223 |
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| End bp | 3413581 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640908856 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001446550 |
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| Protein GI | 156975643 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCATA ATGAGCTTGG GGAGGCACTA ATGTATTTAC CACAAGAAAT TATCCGTAAA
AAACGTGACG GCGAAGTTCT AACAGCCGAC GAAATCAACT TCTTCATTCA AGGCGTAGCA
AACAACAGTG TATCTGAAGG TCAGATCGCC GCATTTGCTA TGACAATCTT CTTCAATGAA
ATGACGATGC CAGAGCGTAT CGCACTAACG TGTGCAATGC GTGATTCAGG TATGGTTATC
GATTGGAACC ACATGAACTT TGGTGGTCCA ATTGTCGATA AGCACTCTAC TGGTGGTGTG
GGTGACGTGA CTTCTTTGAT GCTTGGCCCA ATGGTGGCAG CATGTGGCGG TTTCGTACCT
ATGATCTCTG GTCGTGGTCT TGGCCACACT GGCGGAACGT TGGATAAGCT TGAGTCTATT
CCAGGCTACA ACATCACTCC GACAAACGAC GTATTTGGTC AAGTAACCAA AGATGCAGGC
GTAGCAATCA TCGGTCAAAC TGGTGACCTA GCGCCAGCGG ATAAGCGCGT TTACGCGACT
CGCGATATCA CAGCAACAGT AGACAACATT TCTCTGATCA CGGCGTCGAT TTTATCGAAG
AAGCTTGCTG CAGGTCTTGA ATCTTTAGTG ATGGACGTGA AAGTAGGTTC TGGAGCATTC
ATGCCAACTT ACGAAGCGTC TGAAGAGCTA GCAAAATCTA TCGTTGCAGT AGCAAACGGT
GCTGGTACTA AGACTACGGC AATTCTTACG GACATGAACC AAGTATTGGC GTCTTCGGCG
GGTAACGCAG TGGAAGTTCG CGAAGCGGTT CGTTTCTTAA CGGATGAATA CCGTAACCCT
CGCCTACTTG AAGTGACCAT GGCTTCATGT GCTGAAATGT TGGTGCTTGG CAAATTGGCT
GAGAACACAG AAGACGCACG TGCGAAACTG ATGGAAGCGC TAGATAACGG CAAAGCGGCT
GAGTGCTTCG GTAAGATGGT AGCTGGTCTA GGTGGTCCTG TGGATTTCGT AGAAAACTAC
GATAACTACC TAGAAAAAGC AGAAATCATT AAACCAGTAT ACGCAACAGA AACTGGCGTT
GTATCTGCGA TGGATACACG TGCTATCGGC ATGGCGGTTG TTTCAATGGG CGGCGGTCGT
CGCGTTGCGA CAGATGAAAT CGACTACGCA GTTGGTTTCG ATAACTTCAT CCGTCTTGGT
GAAGTAGCAG ATAGCGACAA ACCTCTTGCG GTTATCCACG CTCGCACTGA AGAGCAGTGG
GAAGAAGCAG CAAAAGCACT TCGCAGTGCA ATCACTGTAG GTGGTGAGTA CACACCAACT
CCAGAGGTTT ACCGCCAAAT CCGTGCAGAA GATCTTTAA
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| Protein sequence | MAHNELGEAL MYLPQEIIRK KRDGEVLTAD EINFFIQGVA NNSVSEGQIA AFAMTIFFNE
MTMPERIALT CAMRDSGMVI DWNHMNFGGP IVDKHSTGGV GDVTSLMLGP MVAACGGFVP
MISGRGLGHT GGTLDKLESI PGYNITPTND VFGQVTKDAG VAIIGQTGDL APADKRVYAT
RDITATVDNI SLITASILSK KLAAGLESLV MDVKVGSGAF MPTYEASEEL AKSIVAVANG
AGTKTTAILT DMNQVLASSA GNAVEVREAV RFLTDEYRNP RLLEVTMASC AEMLVLGKLA
ENTEDARAKL MEALDNGKAA ECFGKMVAGL GGPVDFVENY DNYLEKAEII KPVYATETGV
VSAMDTRAIG MAVVSMGGGR RVATDEIDYA VGFDNFIRLG EVADSDKPLA VIHARTEEQW
EEAAKALRSA ITVGGEYTPT PEVYRQIRAE DL
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