Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03305 |
Symbol | |
ID | 5552855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3335511 |
End bp | 3336428 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908786 |
Product | transcriptional regulator |
Protein accession | YP_001446480 |
Protein GI | 156975573 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAGTC ATATCTCTCT TAAACAACTG AAAGTTTTTA CTACGATCAC TCAGCACAAG ACGCTAACTG CGGCTTCGGA AAGTCTGTTT CTTTCTAAGG CGGCCGTGAG TATGGCGTTG TCTGAACTAG AGAAACAAAT TGGTCATCAC TTATTTGATC GAGTGAACAA CCGTTTGATT CTCAACCAAG AAGGACAAAA ACTTCTGCCC CTCGCAGACG AACTACTCAA CCGAGCTCGG GATATTGAGA GTGTGTTCGA TGGCGACCAA ACTTTATCAG GCTTGCTACG CATTGGTGCC AGCGACACCA TTGGCAACCA AGTCGCACCT TACCTGTTAA GTGATTTTCG TGATGAAACG AATCACCAGT CGCAGAGTTT GTTCATCTCC AACTCTGCCC AGATTTGTGA CATGTTGATC GCTTACGAAC TCGACATCGC GCTCATTGAG GGCAAGACCA TACACCCAGA GTTGGAATCA ACGCAATTCA GTGAAGACGA AATGTGTGTG ATTTGTCCGC CGGACTACCC TAACTTCGAC GCAGGGCCTA TCAGCCTAAA CGAGCTCGAA GACACAGAAT GGATTCTGCG TGAGGCGGGT TCTGGTTCTC GAGAGTTCTT CATGCGCGCC ATCGCTCCGC GTCTAGAACA CTGGCATGAG GCTTTTCAGC TCAACACCAC CGAAGCGCTG ATCAATTCTG TATCTGCCGG ACTTGGCCTA GGTTGTTTAT CACGCCTATC TGCAGAACCT GCAATTCGTG ATGGTCGTGT GAAAATGCTC AACATGCCAC TGGACATGAA GCGTCGCTTC TGGCTTTTGA TCCACAAAGA GAAGTATCAA AACCCGCTTC TGCGTACATT CATTGAATTC TGCCAAGATT GGGAGCGACC AGAGAACCCT CATCTTAAAG ATGGCTAG
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Protein sequence | MPSHISLKQL KVFTTITQHK TLTAASESLF LSKAAVSMAL SELEKQIGHH LFDRVNNRLI LNQEGQKLLP LADELLNRAR DIESVFDGDQ TLSGLLRIGA SDTIGNQVAP YLLSDFRDET NHQSQSLFIS NSAQICDMLI AYELDIALIE GKTIHPELES TQFSEDEMCV ICPPDYPNFD AGPISLNELE DTEWILREAG SGSREFFMRA IAPRLEHWHE AFQLNTTEAL INSVSAGLGL GCLSRLSAEP AIRDGRVKML NMPLDMKRRF WLLIHKEKYQ NPLLRTFIEF CQDWERPENP HLKDG
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