Gene VIBHAR_03302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03302 
SymbolrecC 
ID5552939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3328507 
End bp3332001 
Gene Length3495 bp 
Protein Length1164 aa 
Translation table11 
GC content48% 
IMG OID640908783 
Productexonuclease V subunit gamma 
Protein accessionYP_001446477 
Protein GI156975570 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCTCG GTGCACTTAC TTTGTTTACT GTCTATCACT CCAATCAGGT CGATGTTCTC 
AAATCACTTC TTGTTGAACT GATTCGCATC AATCCATTAG AAAATCCATT CGAAAAAGAG
CAAATTCTGG TTCAAAGCCC GGGTATGTCT CAGTGGTTAA AAATGGAATT GGCGAAAGAG
TTTGGTGTTG CGGCAAACTT AGAATTTCCG CTGCCAGCGA CTTTTATTTG GGACATGTTC
ACCCAAGTAT TGGCTGATGT GCCTAAGCGC AGTGCCTTCA ACAAAGAAGC CATGACGTGG
AAGCTGATGC ACTTGCTACC GGGTTTGTTG AACGAAGCGT CATTCGAACC TTTGGCACGT
TATCTTCAGG ACGACAGTGA CAACTCCAAG CTTTATCAAT TGGCAGAGAA AATTGCCGAT
ATTTTCGATG GCTATTTGGT GTATCGTCCA GAATGGATTG CAAGCTGGGA AGCAGGGCAA
ACGGTGCCCG AACTTGAAGA CGAGCACCCA TGGCAACCGG TTTTGTGGCA AGCGTTGTAC
GATCACACAG TTACCCTTGG GCAATCGCCT TATCATCGTG CCAATTTGTA CGAACACTTC
ATTGATACGC TAGAAAACTT CAACGGCAAT TTTGATCATC TGCCGAAGCG TCTGTTTGTG
TTTGGTATCT CTTCACTGCC GCCACGTTAT ATGGATGCGC TCAAAGCCAT TGGTGAACAC
ATTGATGTGC ATTTGATGTT TACCAACCCT TGTCGTTATT ACTGGGGTGA AGTACGTGAC
CGTAAATTCC TAGCTCGCTT AGCAGCAAAA CATCGTCAGC ACGTGGTGTG GCAAGAAGAC
CATTCTGAAG TGCAAGGTGA GAGTGAGCAG TTAAAAGGTT CACTAGAAGA AAACGTAGTG
GATGAGCTGC ATACTGATGT GGTGGGTAAC AGCTTGTTGG CGTCGATGGG TAAACTTGGG
CGCGATAACA TGTATCTGTT GTCGCAGCTC GAATCCCATG AGATTGAAGC TTTTGTTGAT
GTCGAGCGCG ACAGTCTGCT TCATCAACTT CAAGCTGACA TTCTTAATTT AGAAGAGCAC
CAAGACGACG AGCAAATCGA CAGCAGCCAG CACAAACAAG TGGTGAGTTT GGGTGACAAA
TCTCTGAGCT TGCACTCTTG CCACAGCCCA ATGCGAGAAG TGGAAGTGCT ACACGACCAG
CTTCTGGCGA TGTTCGATGC CGATCCGACA CTGAAACCGC GCGATATTAT TGTCATGGTG
GCAGACATCA ATGCCTACAG CCCTGCGATT CAGGCGGTAT TCGGCAATGC GCCGGGTGAG
CGTTTCATTC CTTACTCGAT TTCAGACCGA ACGGCCGATC AAGAAAGCCC AGTTTTGGCG
GCTTTCATGC AACTTGTTAA TTTACCGAAT ACACGTTGTT TGGCTTCTGA ATTACTTGAG
CTGTTAGAAA CGCCGGCGAT TTTGAAGCGA TTCGGCTTAA GCGAAGATGA CTTCCTTCAA
GCCAAACTAT GGGTGGAAGA ATCTGGTATT CGCTGGGGGC TAGATAGCCA TACCGGCAGC
GAATTTGAAC TGCCAGAAAC ACGCCAAAAT ACATGGCAAT TTGGTATCCA GCGTATGCTG
TTAGGTTACG CGATGCCAGA ATCTTCCGGT TTGTTTGAAG CGCAAGAAGG TAGCCTCTCG
CCATACAATG AAGTGCAAGG TATGGGCGCA GAACTTGCCG GTAAGTTAGC TCACTTTATT
CAACAAATTA GCCAATATCG CCGCAAACTT TCCAATGTTC AGTCGATTGA TGCATGGCGT
GAAACCTTGG TGGCAATGTT GGATGACTTC TTCTCTGTTG AGCTAGAAGG GGAAATGGCG
CTCAAGTCGA TTCGAGATAC CTTAAGCCAA CTGAAAGAAC AGCTAACCGA TGCGGCATTT
GATGATGCCT TGTCGCCTTC TATTGTTAGC CAGTATCTAC AAAACAAGCT GTCAGGAACA
CGGGTCAGCC AGCGCTTCCT TGCCGGACAA GTGAACTTCT GTACTCTAAT GCCGATGCGT
TCGATCCCAT TTAGAACCGT GTGTCTACTG GGTATGAACG ATGGTGTGTA CCCGCGCTCA
ATGCCACCAG AAGGTTTTGA CTTAATGACA GGGCGCACTA AACCGGGCGA CCGTTCACGT
CGAGACGATG ACCGTTACCT ATTCTTAGAA GCCGTGCTGT CTGCACAGCA AAGTTTGTAC
ATCAGTTACG TTGGGCGTTC TATCCAAGAT AACACTGAGC GCGTGCCGTC TGTTCTGGTG
TCTGAATTGA TGGAGTATTG CCATCAGAAC TATTGCCTAG AGGGCGATCA AGATCAACCT
GTTGATGACT CCGGAGATAA ACTACTCAAC GAGTTAGTGA ATGTGCATGC CATGGTGCCA
TTTAGCCCAA GTGCATTCCA AGGTTCTCAT TCAAGCTATG CCAAAGAGTG GATTCCAGCG
GCGTTGACCC AAAGCAACCA ATCACAAGGT CATGCGCGTG GCGAGTTTAA CCGCGCATTG
GATGATTACT TACTCGGTGC AACCTTCCCA ATCGAGTTGG ATTTGGTGGA ATTACAACGC
TTCTGGCGTT TGCCGGTACA GTATTTCTTT AACCGCCGTT TAAAAGTGAT GTTCGAGCCG
CCATTGCCTG TGATGGAAGA TGATGAGCCA TTCGTATTAG GTGGTCTAGA AAGCTATCAA
ATGCGTGATG AGCTACTGGA AACCTTGCTT GAAACCGCCA TTACTCAACC ATCGGTAAAA
GCAGACGTGC TCAAGCACTT TATGAGTGAG CAACGCGCGC AAGGCAAATT ACCGGTTGGT
GCATTTGGTG ATATCGAGTT TGAGACCAAC CGCGTGCAAG CGGAAGAGCT GGTGGATAAG
TTGGCGTTTT TATCTGGTGC TCCGCAAGAC GATTTAGAAA TCGATCTTAC CTTCGATGTG
CTTGGTGAAG GAAAAAACAT CCGTCTAACT GGTTGGCTAA CTCAGTGCTA TCAGTCCGGT
TTGATTCGCT ACCGTAGCGG TAAAATTCGT GCGCAGGATT ACCTTGCTGC ATGGATTGAT
CATCTTGCTA TGTCTGCCTC TGGTCAGCCT AGAAAGACCC ACGTTATCGG TTATGACCGC
AAGGAAGGCG CGGTGCATTT AGTTTACCCA GCAATGGCAG ACGCTGCGCA AGCGAAACAA
CTACTTGCTG AATTAGTACG TCTGTTTTTT GAAGGCATGA CCAAGCCATT ACCATACTTC
CCGAAAACAG CACTGGCGTG TGTTGAGGCG GGCTTTAGTC GTGGCCACTG GGCTGATGAC
GAAGAGAAAT CGCTGAAGAA AATGGCGGAT GCATTCAATG ATGGCTATAT GAGTCCAGGT
GAAGGAAATA ACGCGTATAT TTCGCGTATT TGGTCTACTT GGAATGACGA GCTTGCAGCA
GAAGTTCGCA TGCTGACCGC ATTGGTTCTT CAAGGCGCAA GACTGGCGGC GATGGATGCC
GATGATGAAA AGTAA
 
Protein sequence
MALGALTLFT VYHSNQVDVL KSLLVELIRI NPLENPFEKE QILVQSPGMS QWLKMELAKE 
FGVAANLEFP LPATFIWDMF TQVLADVPKR SAFNKEAMTW KLMHLLPGLL NEASFEPLAR
YLQDDSDNSK LYQLAEKIAD IFDGYLVYRP EWIASWEAGQ TVPELEDEHP WQPVLWQALY
DHTVTLGQSP YHRANLYEHF IDTLENFNGN FDHLPKRLFV FGISSLPPRY MDALKAIGEH
IDVHLMFTNP CRYYWGEVRD RKFLARLAAK HRQHVVWQED HSEVQGESEQ LKGSLEENVV
DELHTDVVGN SLLASMGKLG RDNMYLLSQL ESHEIEAFVD VERDSLLHQL QADILNLEEH
QDDEQIDSSQ HKQVVSLGDK SLSLHSCHSP MREVEVLHDQ LLAMFDADPT LKPRDIIVMV
ADINAYSPAI QAVFGNAPGE RFIPYSISDR TADQESPVLA AFMQLVNLPN TRCLASELLE
LLETPAILKR FGLSEDDFLQ AKLWVEESGI RWGLDSHTGS EFELPETRQN TWQFGIQRML
LGYAMPESSG LFEAQEGSLS PYNEVQGMGA ELAGKLAHFI QQISQYRRKL SNVQSIDAWR
ETLVAMLDDF FSVELEGEMA LKSIRDTLSQ LKEQLTDAAF DDALSPSIVS QYLQNKLSGT
RVSQRFLAGQ VNFCTLMPMR SIPFRTVCLL GMNDGVYPRS MPPEGFDLMT GRTKPGDRSR
RDDDRYLFLE AVLSAQQSLY ISYVGRSIQD NTERVPSVLV SELMEYCHQN YCLEGDQDQP
VDDSGDKLLN ELVNVHAMVP FSPSAFQGSH SSYAKEWIPA ALTQSNQSQG HARGEFNRAL
DDYLLGATFP IELDLVELQR FWRLPVQYFF NRRLKVMFEP PLPVMEDDEP FVLGGLESYQ
MRDELLETLL ETAITQPSVK ADVLKHFMSE QRAQGKLPVG AFGDIEFETN RVQAEELVDK
LAFLSGAPQD DLEIDLTFDV LGEGKNIRLT GWLTQCYQSG LIRYRSGKIR AQDYLAAWID
HLAMSASGQP RKTHVIGYDR KEGAVHLVYP AMADAAQAKQ LLAELVRLFF EGMTKPLPYF
PKTALACVEA GFSRGHWADD EEKSLKKMAD AFNDGYMSPG EGNNAYISRI WSTWNDELAA
EVRMLTALVL QGARLAAMDA DDEK