Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03302 |
Symbol | recC |
ID | 5552939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3328507 |
End bp | 3332001 |
Gene Length | 3495 bp |
Protein Length | 1164 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908783 |
Product | exonuclease V subunit gamma |
Protein accession | YP_001446477 |
Protein GI | 156975570 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGCTCG GTGCACTTAC TTTGTTTACT GTCTATCACT CCAATCAGGT CGATGTTCTC AAATCACTTC TTGTTGAACT GATTCGCATC AATCCATTAG AAAATCCATT CGAAAAAGAG CAAATTCTGG TTCAAAGCCC GGGTATGTCT CAGTGGTTAA AAATGGAATT GGCGAAAGAG TTTGGTGTTG CGGCAAACTT AGAATTTCCG CTGCCAGCGA CTTTTATTTG GGACATGTTC ACCCAAGTAT TGGCTGATGT GCCTAAGCGC AGTGCCTTCA ACAAAGAAGC CATGACGTGG AAGCTGATGC ACTTGCTACC GGGTTTGTTG AACGAAGCGT CATTCGAACC TTTGGCACGT TATCTTCAGG ACGACAGTGA CAACTCCAAG CTTTATCAAT TGGCAGAGAA AATTGCCGAT ATTTTCGATG GCTATTTGGT GTATCGTCCA GAATGGATTG CAAGCTGGGA AGCAGGGCAA ACGGTGCCCG AACTTGAAGA CGAGCACCCA TGGCAACCGG TTTTGTGGCA AGCGTTGTAC GATCACACAG TTACCCTTGG GCAATCGCCT TATCATCGTG CCAATTTGTA CGAACACTTC ATTGATACGC TAGAAAACTT CAACGGCAAT TTTGATCATC TGCCGAAGCG TCTGTTTGTG TTTGGTATCT CTTCACTGCC GCCACGTTAT ATGGATGCGC TCAAAGCCAT TGGTGAACAC ATTGATGTGC ATTTGATGTT TACCAACCCT TGTCGTTATT ACTGGGGTGA AGTACGTGAC CGTAAATTCC TAGCTCGCTT AGCAGCAAAA CATCGTCAGC ACGTGGTGTG GCAAGAAGAC CATTCTGAAG TGCAAGGTGA GAGTGAGCAG TTAAAAGGTT CACTAGAAGA AAACGTAGTG GATGAGCTGC ATACTGATGT GGTGGGTAAC AGCTTGTTGG CGTCGATGGG TAAACTTGGG CGCGATAACA TGTATCTGTT GTCGCAGCTC GAATCCCATG AGATTGAAGC TTTTGTTGAT GTCGAGCGCG ACAGTCTGCT TCATCAACTT CAAGCTGACA TTCTTAATTT AGAAGAGCAC CAAGACGACG AGCAAATCGA CAGCAGCCAG CACAAACAAG TGGTGAGTTT GGGTGACAAA TCTCTGAGCT TGCACTCTTG CCACAGCCCA ATGCGAGAAG TGGAAGTGCT ACACGACCAG CTTCTGGCGA TGTTCGATGC CGATCCGACA CTGAAACCGC GCGATATTAT TGTCATGGTG GCAGACATCA ATGCCTACAG CCCTGCGATT CAGGCGGTAT TCGGCAATGC GCCGGGTGAG CGTTTCATTC CTTACTCGAT TTCAGACCGA ACGGCCGATC AAGAAAGCCC AGTTTTGGCG GCTTTCATGC AACTTGTTAA TTTACCGAAT ACACGTTGTT TGGCTTCTGA ATTACTTGAG CTGTTAGAAA CGCCGGCGAT TTTGAAGCGA TTCGGCTTAA GCGAAGATGA CTTCCTTCAA GCCAAACTAT GGGTGGAAGA ATCTGGTATT CGCTGGGGGC TAGATAGCCA TACCGGCAGC GAATTTGAAC TGCCAGAAAC ACGCCAAAAT ACATGGCAAT TTGGTATCCA GCGTATGCTG TTAGGTTACG CGATGCCAGA ATCTTCCGGT TTGTTTGAAG CGCAAGAAGG TAGCCTCTCG CCATACAATG AAGTGCAAGG TATGGGCGCA GAACTTGCCG GTAAGTTAGC TCACTTTATT CAACAAATTA GCCAATATCG CCGCAAACTT TCCAATGTTC AGTCGATTGA TGCATGGCGT GAAACCTTGG TGGCAATGTT GGATGACTTC TTCTCTGTTG AGCTAGAAGG GGAAATGGCG CTCAAGTCGA TTCGAGATAC CTTAAGCCAA CTGAAAGAAC AGCTAACCGA TGCGGCATTT GATGATGCCT TGTCGCCTTC TATTGTTAGC CAGTATCTAC AAAACAAGCT GTCAGGAACA CGGGTCAGCC AGCGCTTCCT TGCCGGACAA GTGAACTTCT GTACTCTAAT GCCGATGCGT TCGATCCCAT TTAGAACCGT GTGTCTACTG GGTATGAACG ATGGTGTGTA CCCGCGCTCA ATGCCACCAG AAGGTTTTGA CTTAATGACA GGGCGCACTA AACCGGGCGA CCGTTCACGT CGAGACGATG ACCGTTACCT ATTCTTAGAA GCCGTGCTGT CTGCACAGCA AAGTTTGTAC ATCAGTTACG TTGGGCGTTC TATCCAAGAT AACACTGAGC GCGTGCCGTC TGTTCTGGTG TCTGAATTGA TGGAGTATTG CCATCAGAAC TATTGCCTAG AGGGCGATCA AGATCAACCT GTTGATGACT CCGGAGATAA ACTACTCAAC GAGTTAGTGA ATGTGCATGC CATGGTGCCA TTTAGCCCAA GTGCATTCCA AGGTTCTCAT TCAAGCTATG CCAAAGAGTG GATTCCAGCG GCGTTGACCC AAAGCAACCA ATCACAAGGT CATGCGCGTG GCGAGTTTAA CCGCGCATTG GATGATTACT TACTCGGTGC AACCTTCCCA ATCGAGTTGG ATTTGGTGGA ATTACAACGC TTCTGGCGTT TGCCGGTACA GTATTTCTTT AACCGCCGTT TAAAAGTGAT GTTCGAGCCG CCATTGCCTG TGATGGAAGA TGATGAGCCA TTCGTATTAG GTGGTCTAGA AAGCTATCAA ATGCGTGATG AGCTACTGGA AACCTTGCTT GAAACCGCCA TTACTCAACC ATCGGTAAAA GCAGACGTGC TCAAGCACTT TATGAGTGAG CAACGCGCGC AAGGCAAATT ACCGGTTGGT GCATTTGGTG ATATCGAGTT TGAGACCAAC CGCGTGCAAG CGGAAGAGCT GGTGGATAAG TTGGCGTTTT TATCTGGTGC TCCGCAAGAC GATTTAGAAA TCGATCTTAC CTTCGATGTG CTTGGTGAAG GAAAAAACAT CCGTCTAACT GGTTGGCTAA CTCAGTGCTA TCAGTCCGGT TTGATTCGCT ACCGTAGCGG TAAAATTCGT GCGCAGGATT ACCTTGCTGC ATGGATTGAT CATCTTGCTA TGTCTGCCTC TGGTCAGCCT AGAAAGACCC ACGTTATCGG TTATGACCGC AAGGAAGGCG CGGTGCATTT AGTTTACCCA GCAATGGCAG ACGCTGCGCA AGCGAAACAA CTACTTGCTG AATTAGTACG TCTGTTTTTT GAAGGCATGA CCAAGCCATT ACCATACTTC CCGAAAACAG CACTGGCGTG TGTTGAGGCG GGCTTTAGTC GTGGCCACTG GGCTGATGAC GAAGAGAAAT CGCTGAAGAA AATGGCGGAT GCATTCAATG ATGGCTATAT GAGTCCAGGT GAAGGAAATA ACGCGTATAT TTCGCGTATT TGGTCTACTT GGAATGACGA GCTTGCAGCA GAAGTTCGCA TGCTGACCGC ATTGGTTCTT CAAGGCGCAA GACTGGCGGC GATGGATGCC GATGATGAAA AGTAA
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Protein sequence | MALGALTLFT VYHSNQVDVL KSLLVELIRI NPLENPFEKE QILVQSPGMS QWLKMELAKE FGVAANLEFP LPATFIWDMF TQVLADVPKR SAFNKEAMTW KLMHLLPGLL NEASFEPLAR YLQDDSDNSK LYQLAEKIAD IFDGYLVYRP EWIASWEAGQ TVPELEDEHP WQPVLWQALY DHTVTLGQSP YHRANLYEHF IDTLENFNGN FDHLPKRLFV FGISSLPPRY MDALKAIGEH IDVHLMFTNP CRYYWGEVRD RKFLARLAAK HRQHVVWQED HSEVQGESEQ LKGSLEENVV DELHTDVVGN SLLASMGKLG RDNMYLLSQL ESHEIEAFVD VERDSLLHQL QADILNLEEH QDDEQIDSSQ HKQVVSLGDK SLSLHSCHSP MREVEVLHDQ LLAMFDADPT LKPRDIIVMV ADINAYSPAI QAVFGNAPGE RFIPYSISDR TADQESPVLA AFMQLVNLPN TRCLASELLE LLETPAILKR FGLSEDDFLQ AKLWVEESGI RWGLDSHTGS EFELPETRQN TWQFGIQRML LGYAMPESSG LFEAQEGSLS PYNEVQGMGA ELAGKLAHFI QQISQYRRKL SNVQSIDAWR ETLVAMLDDF FSVELEGEMA LKSIRDTLSQ LKEQLTDAAF DDALSPSIVS QYLQNKLSGT RVSQRFLAGQ VNFCTLMPMR SIPFRTVCLL GMNDGVYPRS MPPEGFDLMT GRTKPGDRSR RDDDRYLFLE AVLSAQQSLY ISYVGRSIQD NTERVPSVLV SELMEYCHQN YCLEGDQDQP VDDSGDKLLN ELVNVHAMVP FSPSAFQGSH SSYAKEWIPA ALTQSNQSQG HARGEFNRAL DDYLLGATFP IELDLVELQR FWRLPVQYFF NRRLKVMFEP PLPVMEDDEP FVLGGLESYQ MRDELLETLL ETAITQPSVK ADVLKHFMSE QRAQGKLPVG AFGDIEFETN RVQAEELVDK LAFLSGAPQD DLEIDLTFDV LGEGKNIRLT GWLTQCYQSG LIRYRSGKIR AQDYLAAWID HLAMSASGQP RKTHVIGYDR KEGAVHLVYP AMADAAQAKQ LLAELVRLFF EGMTKPLPYF PKTALACVEA GFSRGHWADD EEKSLKKMAD AFNDGYMSPG EGNNAYISRI WSTWNDELAA EVRMLTALVL QGARLAAMDA DDEK
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