| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03222 |
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| Symbol | dnaE |
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| ID | 5554167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3245590 |
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| End bp | 3249021 |
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| Gene Length | 3432 bp |
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| Protein Length | 1143 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640908703 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001446398 |
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| Protein GI | 156975491 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGATG GTATCAACAA AGTTCCACCG CTCGTTAAGA AAGTCGCCGA ACTCGGCATG
CCTGCAATGG CATTGACCGA TTTCACTAAC CTATGTGGTT TGGTGAAATA CTATGGCACT
GCGCACGGCA GTGGTGTGAA GCCAATCATC GGTGCTGATT TCAAAATGCA ATCGGATGAG
TTTGGCGAGG AGCTGACGCA ATTAACGTTA CTTGCGGCAA ACAACGAAGG TTATAAAAAC
CTCACGTTGC TGATCTCAAA AGCTTACCTT CGTGGTCACG TACAGCACCA ACCGGTGCTC
GACAAAGCTT GGTTGGCTGA ACTATCAGAA GGTTTGATCG TTCTATCAGG CGCGAAAAAC
GGTGAAATCG GTAAAGCATT GCTAAAAGGC AACCGTAAAG TTGTCGACAG TTGTGTCGAG
TTCTACAACC AATACTTCCC AGATCGCTTC TATCTAGAAT TGGTTCGTAC TGGTCGTCCG
GATGAAGAAA CTTACCTGCA CTTTGCGATC GAATTGGCAG AAGAGCTTGA ATTGCCAGTC
GTTGCAACCA ACGAAGTTGT TTTCATCAGT GAAGACTTAT TTGACGCCCA TGAAATCCGC
GTTGCAATCC ACGATGGTTA CACCCTAGAA GATCCGCGTC GTCCAAAGAA CTACAGCCCA
GAACAATACC TGCGTACTGA AGAGGAAATG TGCGAGCTGT TTGCCGACAT TCCGGAAGCG
TTAGAAAACA GTGTTGAAAT TGCCAAGCGT TGTAACGTGA CAGTACGTTT GGGTGAATAC
TTCCTACCTG CCTTCCCAAC TGAAGGTATG GAAGAGACCG ACTTCTTGGT CATGAAGTCT
CGTGAAGGTC TTGAAGAGCG TCTAGAGTTC CTGTTCCCAG ATGAGGAAGA GCGCAAGCAG
CGTCGTCCTG AATACGATGA TCGTCTGCAA ATCGAACTCG ACGTAATCAA CCAAATGGGA
TTCCCTGGTT ACTTCTTGAT CGTAATGGAG TTCATCCAGT GGTCGAAAGA CAACGCGATT
CCGGTAGGTC CGGGTCGTGG TTCGGGTGCT GGTTCTTTGG TGGCATATGC ACTGAAGATC
ACCGACCTTG ACCCATTGGA ATACGACCTT CTATTCGAAC GTTTCTTGAA CCCAGAACGA
GTCTCGATGC CCGATTTCGA CGTCGACTTC TGTATGGATA AGCGTGACCA AGTAATTGAC
CACGTTGCGG AAATGTATGG CCGTGATGCG GTATCACAGA TCATCACCTT TGGTACCATG
GCGGCGAAAG CGGTAATCCG TGACGTAGGC CGTGTACTTG GCCACCCGTT TGGCTTCGTT
GATCGTATTT CAAAATTGGT TCCGCCTGAT CCGGGCATGA CGCTAGAGAA AGCGTTCAAA
GCTGAGCCTG CACTGCCAGA GTTGTATGAC GCAGACGAAG AAGTGAAAGA GCTTATCGAC
ATGTGTCGCC TCCTTGAAGG TTGTACACGT AATGCCGGTA AGCACGCGGG TGGTGTTGTA
ATCTCACCAA CCACCATTAC AGACTTCGCG CCGATTTATG CTGACTCGGA AGGTCACTTC
CCGGTTACTC AGTTTGATAA GAACGACGTT GAAACGGCCG GTCTGGTTAA GTTTGACTTC
TTGGGTCTGC GTACCCTAAC CATCATCGAC TGGGCGTTGG GTCTGATTAA CCCGCGTCTA
GAACGCGAAG GCAAAGATCC TGTTCGCATC GAATCGATTC CACTGGATGA TGCGGCGTCA
TTCCGTTTGC TGCAAAACTC AGAAACCACT GCGGTATTCC AGCTTGAATC GCGCGGTATG
AAAGAGCTGA TTAAACGTCT GCAACCGGAC TGTTTTGAAG ACATCATCGC ATTGGTGGCA
CTGTTCCGTC CGGGCCCATT GCAGTCGGGC ATGGTAGATA ACTTTATCGA CCGTAAGCAC
GGTCGTGAGG CGATCTCTTA TCCTGATGAA AAGTGGCAAC ACGAATCGCT TAAAGAGATT
CTGGATCCGA CTTACGGCAT CATCCTGTAT CAAGAACAGG TAATGCAGAT TGCACAGGTA
CTGTCTGGCT ACACCCTTGG TGGTGCGGAC ATGCTTCGTC GTGCGATGGG TAAGAAAAAA
CCGGAAGAGA TGGCGAAACA GCGTGCTACC TTCGAAGAGG GGGCAATTGC CAACGGCGTC
GATGGCGAGT TGGCGATGAA GATCTTCGAC TTGGTAGAGA AGTTCGCGGG TTACGGCTTT
AATAAATCTC ACTCGGCAGC CTACGCACTG GTTTCGTACC AAACGCTATG GCTGAAGATG
CACTATCCGG CAGAATTCAT GGCAGCGGTA ATGACCGCCG ATATGGATAA CACTGAGAAA
GTGGTTGGCC TAGTAGACGA ATGTTTCCGC ATGAAACTCA CCGTGCTTCC GCCAGACATC
AATGCCGGCT TGTACCGCTT TAACGTGGAT GAGAATGGCG CGATTGTTTA CGGCATCGGC
GCGATTAAAG GTGTGGGCGA AGGTCCGATC GATGCGATCT TAGAAGCGCG CAACAAAGGT
GGTCACTTCA TTGACCTATT TGACTTCTGT GCGCGAATCG ACCTGAAAAA GGTCAACAAG
CGTGTTATCG AAAAACTGAT TTACGCGGGC GCACTCGACA GGCTCGGTCC ACACCGTGCG
GCATTGATGG CATCGCTCAA TGATGCGGTG AAAGCGGCAA GCCAACACCA CCAAGCGGAA
GCCTTTGGTC AAACCGATAT GTTCGGTGTT TTGACTGATG CGCCAGAAGA GGTGGAACAC
AAATATACTC AAGTGCCAGC ATGGCCAGAG AAAGTATGGT TAGAGGGTGA ACGTGAGACG
CTCGGTTTAT ATTTGACCGG CCACCCAGTT AACGCATACA TAAAGGAACT AAATAAATAC
GTTAGTTGTC GACTAAAAGA CGCAACCCCA ACTCGCCGTG ATCAATCCGT GACAGTAGCG
GGCTTGGTAA TTGCAGCTCG TGTGATGACA ACCAAGCGTG GTACGCGAAT CGGCATCATG
ACTCTGGACG ATCGAAGCGG TCGAATGGAG GTGATGTTGT TCTCGGATGC GCTTGATAGG
TATGCAGAAC TTCTCGAAAA AGATAAAATT CTGGTGGTTT CTGGACAGGT CAGCTTTGAT
GACTTCAACG GTGGCCTTAA AATGTCGGCG CGTGAAGTTA TGGATCTGGG TACTGCACGT
GAAAAATACG CACGTGGTTT GTCGGTATCT ATTGATGCTA ACCAGATCAA CGATAAATTC
TTTGAACAAT TTACGCGTAT TTTAGAGCCG CACAAAGCCG GAACCGTACC TGTCAATGTA
TACTACCAGC GTGCCGACGC CAGAGCGCGG TTAACATTGG GCACCGAGTG GCGAGTAACG
CCAACTGATA CATTGCTAGA CGATTTAAAA CAGTTACTTG GTAAAGGCCA AGTAGAACTC
GAATTTAACT AA
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| Protein sequence | MVDGINKVPP LVKKVAELGM PAMALTDFTN LCGLVKYYGT AHGSGVKPII GADFKMQSDE
FGEELTQLTL LAANNEGYKN LTLLISKAYL RGHVQHQPVL DKAWLAELSE GLIVLSGAKN
GEIGKALLKG NRKVVDSCVE FYNQYFPDRF YLELVRTGRP DEETYLHFAI ELAEELELPV
VATNEVVFIS EDLFDAHEIR VAIHDGYTLE DPRRPKNYSP EQYLRTEEEM CELFADIPEA
LENSVEIAKR CNVTVRLGEY FLPAFPTEGM EETDFLVMKS REGLEERLEF LFPDEEERKQ
RRPEYDDRLQ IELDVINQMG FPGYFLIVME FIQWSKDNAI PVGPGRGSGA GSLVAYALKI
TDLDPLEYDL LFERFLNPER VSMPDFDVDF CMDKRDQVID HVAEMYGRDA VSQIITFGTM
AAKAVIRDVG RVLGHPFGFV DRISKLVPPD PGMTLEKAFK AEPALPELYD ADEEVKELID
MCRLLEGCTR NAGKHAGGVV ISPTTITDFA PIYADSEGHF PVTQFDKNDV ETAGLVKFDF
LGLRTLTIID WALGLINPRL EREGKDPVRI ESIPLDDAAS FRLLQNSETT AVFQLESRGM
KELIKRLQPD CFEDIIALVA LFRPGPLQSG MVDNFIDRKH GREAISYPDE KWQHESLKEI
LDPTYGIILY QEQVMQIAQV LSGYTLGGAD MLRRAMGKKK PEEMAKQRAT FEEGAIANGV
DGELAMKIFD LVEKFAGYGF NKSHSAAYAL VSYQTLWLKM HYPAEFMAAV MTADMDNTEK
VVGLVDECFR MKLTVLPPDI NAGLYRFNVD ENGAIVYGIG AIKGVGEGPI DAILEARNKG
GHFIDLFDFC ARIDLKKVNK RVIEKLIYAG ALDRLGPHRA ALMASLNDAV KAASQHHQAE
AFGQTDMFGV LTDAPEEVEH KYTQVPAWPE KVWLEGERET LGLYLTGHPV NAYIKELNKY
VSCRLKDATP TRRDQSVTVA GLVIAARVMT TKRGTRIGIM TLDDRSGRME VMLFSDALDR
YAELLEKDKI LVVSGQVSFD DFNGGLKMSA REVMDLGTAR EKYARGLSVS IDANQINDKF
FEQFTRILEP HKAGTVPVNV YYQRADARAR LTLGTEWRVT PTDTLLDDLK QLLGKGQVEL
EFN
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