| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03214 |
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| Symbol | |
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| ID | 5554912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 3238930 |
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| End bp | 3240516 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640908696 |
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| Product | membrane-bound lytic murein transglycosylase D |
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| Protein accession | YP_001446391 |
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| Protein GI | 156975483 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTAA AGTACAGTTG GGCGTTGGCG TTACTACTTT CTGGCTGTCA ATTGACACAG
TCAGATTCAA CAAACACTCC AACACCAGAA ACCAATAAGT CCGAGCAAGC GGTAAAACAA
GACGCGGCTC AAGCGGACTC CAAGAAAAAG CTATCGATAG CAAAGAAACC TGCTAAAGAG
ACGCCGAAAA CTCTTTCTCC TCAGGAACAA GAAGATGTAT GGCGTCGTAT CGGCATACAG
CTTGAGATGG ACATCCCAGA CAACAAGAAA GTGGCTTACT ACCGTACATG GTATCTGAAG
CATCCTAACC ACCTGCGCAC CGTTTCTGAG CGTGCACAGC CGTTTTTGTA CATGATTACA
AAACGCATTG AAGAACGTGG TCTTCCAATG GAGTTGGCGC TTCTACCTAT CGTAGAGAGC
TCATTTGACC CATTCGCGTA CTCACACGGC AGTGCGGCAG GTCTTTGGCA GTTCGTTCCT
GGCACCGGCA AGATGATGGG CCTAGAGCAA AACTACTGGT ACGACGGTCG TCGTGATGTG
TACGCAGCGA CAGATGCTGC TCTTGATTAC CTAGAGCAAC AAAGCGAGCG CTTTGACGGT
AACTGGGACC AAGCGATTGC CGCTTACAAC AGTGGTGGCG GTCGTGTATC AAGCGCGATT
CGTAAGAACA AAAAGCTAGG TAAACCTACA GACTTCTTCT CTTTGGACCT TCCAAAAGAG
ACCAGCAGTT ACGTTCCTAA GCTACTTGCG CTTGCAGACA TCATTGCGAA CCAAGACAAA
TACGGCATCG ACATTCCACC AATCGCGAAC AAACCTGTTC TGGTTCAGGT TGATCCAAAA
GAACAATTAG ACCTAGCGAT TGCTGCCGAT TACGCAGGCA TTGGTGTCAA AGAGCTGCAA
GGTTACAACC CGGCTTACAA CCAATGGTCT ACGGCACCTG ACGGCCCGCA CCAGCTTCTT
ATTCCTATCG AGAAAAAGGA TCAGTTCCTT GCTCAGGTGA AAAAGAACCG TGGTAAAGGC
ATGAAGGTCG CACGCTACAA AGTGAAGCGT GGTGACTCGC TCAGCGTATT GGCTCAGAAG
TACGGTACGA CAACCAAAGT TATCCAACGT GCTAACGGCC TAACCAACAA CAACATTCGC
GTTGGTCAGT ACCTAATGAT CCCAACGTCA ACTAAAGACG ATGCTAAGTA CGCACTTACT
GCGGAAAATC GCCTAAACAA AACGCAATCT AAATCTCGCG GTCAATTCAA ACTGACTCAC
GTTGTCCAAC CTGGTGAGAG CTTGTGGTCT ATCGCAAAAG AGAACAAGGT TTCTCATAAG
TCTCTAGCGA AATGGAACGG CATGGGACCA AAAGACACCT TGCGCATTGG CCAAAAGCTG
GTGATTTGGA AGAACTCAGA CAAGGGCGCC GTCATTCGCA CCGTTTTCTA TAACGTGCGT
TCTGGCGATA CCATCAGTGG CATTGCGAGT AAGTTTAAGG TGAAGAGCAA CGACATCGTG
AAATGGAATT CTCTTCAAAA GCAGAAGTAC CTGAAACCAG GTCAGAAGCT TAAGTTGTAT
GTTGACGTAA CTAAGGTAAG TGTATGA
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| Protein sequence | MRLKYSWALA LLLSGCQLTQ SDSTNTPTPE TNKSEQAVKQ DAAQADSKKK LSIAKKPAKE
TPKTLSPQEQ EDVWRRIGIQ LEMDIPDNKK VAYYRTWYLK HPNHLRTVSE RAQPFLYMIT
KRIEERGLPM ELALLPIVES SFDPFAYSHG SAAGLWQFVP GTGKMMGLEQ NYWYDGRRDV
YAATDAALDY LEQQSERFDG NWDQAIAAYN SGGGRVSSAI RKNKKLGKPT DFFSLDLPKE
TSSYVPKLLA LADIIANQDK YGIDIPPIAN KPVLVQVDPK EQLDLAIAAD YAGIGVKELQ
GYNPAYNQWS TAPDGPHQLL IPIEKKDQFL AQVKKNRGKG MKVARYKVKR GDSLSVLAQK
YGTTTKVIQR ANGLTNNNIR VGQYLMIPTS TKDDAKYALT AENRLNKTQS KSRGQFKLTH
VVQPGESLWS IAKENKVSHK SLAKWNGMGP KDTLRIGQKL VIWKNSDKGA VIRTVFYNVR
SGDTISGIAS KFKVKSNDIV KWNSLQKQKY LKPGQKLKLY VDVTKVSV
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