Gene VIBHAR_03156 details

Gene Information

• Locus tag: VIBHAR_03156
• ID: 5553718
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 3184319
• End bp: 3186379
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640908637
• Product: hypothetical protein
• Protein accession: YP_001446332
• Protein GI: 156975425
• COG category: [N] Cell motility
• COG ID: [COG3144] Flagellar hook-length control protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAATCCG ACAGCGACTT GCTCAACGCT GCCGATGACG AGAGTTTCTA TATGAATGTG 
AATTTATCCA ATGTTTCTGC AACCAATAAG GCATCGGTTT CCGATTCTTC AAATAAAGTT 
GATGCAGAAA ACCCTGAAAG CAAAGGTTTT TTTGAAACCT TAGCCGGGGT ATTCACTGAT 
TCACAAAAAG CCGAAAAAGC GGTCGCAAAA TCTGATGCGC CAGACGCTGC TTTAGAAACC 
TCGGAGAAGG CTGGGAAAGT AGTATCCCAA ACCCCACAGG GTGAGAGCCA AGAAAAAGTC 
GCGCAAGATA CAGGCAATGC GACCTCGACA GAATCAGCCG ATGAGTTGCT TGCTCAGGGG 
GAAGGGAAGC AAGCGACGAA TAGTTCTGTT GAATCTTCAG AAAATGACGC CTCTTCTGAC 
AATGTTAAGG CTTCAAATTC ATCAGACGAC ACAAGCCCAA GTGAAACGAA AGTGAGTAAA 
GCTGATGTCG CCGATCAAGC CTCCGAGTCT CAAGTGAAAA GTGCAATGGG AGAGGGGCAG 
CAGTTATTGG GTCGCATAGA GCAAGCAAAC CAAACGCTTA AGACTAATGA GCAATTAATT 
GATAGCGGCA AAGCATTGCC ACCAGAGGCA GCACAAACCC ATGGCGCCTC TCAACAAGTC 
AAAGACCATG TGGTTACTCC AGATCAACAA GCCGTATCAA TCTCGGTGAA ATCTGTCGAG 
CAAGATGATG TTTTACCAAT CCATGCTGCA GAAAAAGTAG CATTGGATGC AAATGGTAAA 
CCTATTGCAA CAGCGGTAGA GGTTTCACCA AATGCACAAA CAAGCAATGC GGCGCAGAGT 
ACTGCGTCTA CACAAATTGA TTGGAATTCA CCAAGCTCTC AAGCCGCCCA TAATGAAGCG 
ATGGTAAATG CTACAACGCA AGCGGCGGTT AACGGCCAAG TTGTTGCACA AGGCGTGCAG 
GTGTTAGCAG GAACTGAAGC GCTACAATCC GTATTGCCAG CAGATGCACA GACAACGAAT 
ACCGAGGTTG CGGACGTACA GCGTATCTCA CCGGATGAGC TGCAAGTCAT CGACACTAAA 
CTTGCTCAAG GAAAGCCACT GTCTCAGCAA GAACTTGATG TGATTGAGGG GTTAAAAACG 
GGTGAGTTGG TCGCTGATAT TCCGGTACAA GAATTAGCGC AATTCGTCGC ATTACCAAGT 
GATGTTAAAG TGGCGATGGC GGAGCATCAA GCCGCTCATA ACCAAACTCG TGTCGCCGCT 
TCAACAGTGG CCGCCCAACA GGCTCATCAA CTAGTCACGC AGGACATGAA GCACGCTGCA 
GCTCAAGCGA GTGGGCAGGC AGCCGCATCC CCAAATGCTG ACAAAGCCGC GTTATCTGCA 
ATGCCAGAAG CGCTAGTGGC AGCGAATTTA AACCCAGCTG CGCAGGCGGC TTCTAGTGCA 
GAGCTGAGTA AGAAAGTGAT TAATGCTGGC CTTGCTGCAG GCGCATTGAA AGGTGTAACG 
AATAAGCAAG ATAAGCCTGA TCCACAACAT GGTTTAGCGG GACAAATTCA AGCGGCAGCA 
GGTCAACAAG GCGTGACAGC TCAGCAACAA GCCCGTGTCG ATGCTGCCCA GCAAGCACAG 
TTACCGTTGC AACTAACCAA AGAACTGGCC AATGACCAAG TGGCCGAGAA AGTACAAATG 
ATGATGTCGA AGAACTTAAA GAACCTCGAT ATCCGTCTTG ATCCGCCAGA ACTTGGTCGT 
ATGCAGATCC GCATGACAAT GAACAACGAT CTTGCCAATG TTCATTTTAC GGTGGCAAAC 
CCGCAAGCGC GTGACTTGAT TGAACAAACG CTGCCTCGAC TAAGAGAAAT GTTGGCTCAG 
CAGGGCATGC AATTGGCAGA TTCTTCGGTT CAGCAACAGA GCAGTGGCCA GCAGCAAAGT 
GGTTACGCTA ATGCGGAACA AAACGGTCAA GGCTCTCAAG GTCGTGGATT TTCTGGCCAG 
TCAGATGAAA ACTTTGATGC CGACACGAAT CTTGATTTGA ATGTGGTTTC AAAGCGTGAT 
GGAATTAGTT TTTACGCATA A 

 

Protein sequence

MQSDSDLLNA ADDESFYMNV NLSNVSATNK ASVSDSSNKV DAENPESKGF FETLAGVFTD 
SQKAEKAVAK SDAPDAALET SEKAGKVVSQ TPQGESQEKV AQDTGNATST ESADELLAQG 
EGKQATNSSV ESSENDASSD NVKASNSSDD TSPSETKVSK ADVADQASES QVKSAMGEGQ 
QLLGRIEQAN QTLKTNEQLI DSGKALPPEA AQTHGASQQV KDHVVTPDQQ AVSISVKSVE 
QDDVLPIHAA EKVALDANGK PIATAVEVSP NAQTSNAAQS TASTQIDWNS PSSQAAHNEA 
MVNATTQAAV NGQVVAQGVQ VLAGTEALQS VLPADAQTTN TEVADVQRIS PDELQVIDTK 
LAQGKPLSQQ ELDVIEGLKT GELVADIPVQ ELAQFVALPS DVKVAMAEHQ AAHNQTRVAA 
STVAAQQAHQ LVTQDMKHAA AQASGQAAAS PNADKAALSA MPEALVAANL NPAAQAASSA 
ELSKKVINAG LAAGALKGVT NKQDKPDPQH GLAGQIQAAA GQQGVTAQQQ ARVDAAQQAQ 
LPLQLTKELA NDQVAEKVQM MMSKNLKNLD IRLDPPELGR MQIRMTMNND LANVHFTVAN 
PQARDLIEQT LPRLREMLAQ QGMQLADSSV QQQSSGQQQS GYANAEQNGQ GSQGRGFSGQ 
SDENFDADTN LDLNVVSKRD GISFYA