| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03149 |
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| Symbol | fliR |
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| ID | 5554258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3179860 |
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| End bp | 3180642 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640908630 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001446325 |
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| Protein GI | 156975418 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTATC CGACCCATAT CGTCCTCGAC TGGATCGCAA ACTACTTTTG GCCCTATACC
CGCATCTCTG CCATGTTGAT GGTGATGACG GTAACTGGGG CACGCTTCGT CTCGCCTCGA
ATTCGGCTCT ATCTTGGTCT CGCGATCACT TTTGCGGTCG CGCCTGCGAT TCCTGCCGTG
CCTCAAGACA TTGAATTACT CTCTTTCCGT GGTTTTATGA CCATCGCAGA GCAAATCGTT
ATTGGCGTTG CGATGGGCAT GGTGACCCAG TTTATGATTC AAACCTTTGT TCTACTTGGT
CAGATCTTGG GTATGCAATC GAGCTTGGGT TTTGCCTCGA TGGTGGACCC TGCGAACGGT
CAAAACACGC CTTTGCTTGG TCAGCTGTTT ATGTTTTTGG CGACCATGTT CTTCCTCGCT
ACCGACGGGC ATTTAAAAAT GCTGCAACTG GTGGTGTTCA GCTTTAAAAC CTTGCCGATT
GGGTCCGGTT CGCTCAATGC GGTCGACTTC CGTGAAATGG CGAGTTGGCT TGGCATCATG
TTTAAGACGG CACTCAGTAT GTCGTTGTCG GGCATTATTG CGCTGCTGAC GATTAACTTG
TCATTCGGTG TAATGACACG CGCTGCACCA CAGCTGAACA TCTTCTCGCT TGGTTTTGCC
TTCGCCTTGA TGGTGGGCTT GTTACTTTGT TGGTACATCT TGGCTGGTTT GTACAGTCAT
TATGAATTGT TCTGGGCTGT AGGTGAGGAA CAGATTTGTA ACCTCATTCG CTTGGATTGC
TAG
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| Protein sequence | MEYPTHIVLD WIANYFWPYT RISAMLMVMT VTGARFVSPR IRLYLGLAIT FAVAPAIPAV
PQDIELLSFR GFMTIAEQIV IGVAMGMVTQ FMIQTFVLLG QILGMQSSLG FASMVDPANG
QNTPLLGQLF MFLATMFFLA TDGHLKMLQL VVFSFKTLPI GSGSLNAVDF REMASWLGIM
FKTALSMSLS GIIALLTINL SFGVMTRAAP QLNIFSLGFA FALMVGLLLC WYILAGLYSH
YELFWAVGEE QICNLIRLDC
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