Gene VIBHAR_03131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03131 
Symbol 
ID5553722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3162528 
End bp3163013 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content45% 
IMG OID640908612 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_001446307 
Protein GI156975400 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGA GACGTAAAAA GAGGCTAGGC ATTGTTTTAG CAATCTTTAT CGGTATTAGT 
GCAACCATCG GTTTAATGCT ATATGCACTG AACCAAAACA TGGATCTATT CTACACGCCG 
ACGGAATTGG TAAACGGTAA GCCAGACGGT ACTAAACCTG AAGTAGGCCA ACGCCTGCGT 
ATCGGTGGCA TGGTGGTTGA AGGTTCGGTT CGCCGTGACC CTGAATCATT AAAAGTAAGC 
TTTGATCTGC ACGATGTGGG CCCTAAAGTA ACCATCGTTT ATGAAGGTAT CCTTCCTGAC 
TTGTTCCGTG AAGGTCAAGG TATCGTTGCT CAAGGTGTTC TTGAAGACGC AACAACCGTA 
AAAGCTTTTG AAGTGTTGGC AAAACACGAC GAAGAATACA TGCCACCTGA GATTGCAGAA 
GCAATGAAGA AGACTCATGA GCCTCTGCAG TACACAACTG AACAGAAACA AGGAAGCGGC 
CAATGA
 
Protein sequence
MNPRRKKRLG IVLAIFIGIS ATIGLMLYAL NQNMDLFYTP TELVNGKPDG TKPEVGQRLR 
IGGMVVEGSV RRDPESLKVS FDLHDVGPKV TIVYEGILPD LFREGQGIVA QGVLEDATTV 
KAFEVLAKHD EEYMPPEIAE AMKKTHEPLQ YTTEQKQGSG Q