| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03130 |
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| Symbol | |
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| ID | 5553745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3160549 |
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| End bp | 3162531 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640908611 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446306 |
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| Protein GI | 156975399 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCTG AAATCGGTCA CTTTGCCCTC ATACTCTCGC TAGCAATGGC ATTATTGCTC
AGCGTATTGC CGCTATGGGG CGCATCAAAT AACAACACCA TGCTGATGAA TACAGCACGA
CCGCTTTCGT GGTCGATGTT CGTCATGCTG TTTTTCTCTT TCGTTATTCT ATGTTGGGGT
TTTTATACCA ACGACTTTAC TCTGCAATAT GTAGCAAGTA ACTCAAACAG CCAACTGCCT
TGGTACTATC GTCTGACTGC TGTTTGGGGC GCGCACGAAG GTTCATTGTT GCTGTGGGTA
CTTATCCAAG CTGCGTGGAC AGTGGCAGTT GCTACTTTCA GCCGTGGCAT GCCACAAGAA
TCGGTTGCTC GTGTACTTGC AGTAATGGGT ATGATCTCGG TGGGCTTCTT GCTGTTTATC
ATCCTGACGT CTAACCCATT CCTACGTACG TTGCCATTCT TCCCGGTCGA TGGCCGTGAC
TTGAACCCAC TTCTTCAAGA CCCGGGTTTG ATCGTTCACC CACCGATGCT TTACATGGGC
TACGTAGGTT TCTCGGTAGC GTTCTCGTTT GCCATTGCGT CTTTGATGAC AGGTCGTCTT
GATACGGCTT GGGCTCGTTG GTCTCGTCCT TGGACAACGG CAGCTTGGGT ATTCCTGACA
CTAGGTATCG CACTAGGTTC TTGGTGGGCT TACTACGAAC TTGGCTGGGG TGGCTGGTGG
TTCTGGGATC CAGTAGAAAA CGCATCATTC ATGCCTTGGC TAGCGGGTAC AGCATTGATG
CACTCCCTAG CGGTGACCGA AAAACGCGGT ACGTTCAAAG CGTGGACAGT GCTACTGGCG
ATCTCGGCAT TCTCATTAAG TTTGCTAGGC ACCTTCTTGG TTCGTTCCGG TATCTTGGTA
TCGGTTCACG CGTTCGCGTC AGATCCATCA CGCGGTATGT TTATCCTTGG TTTCCTAGTC
TTCGTTATCG GCGGCTCACT CCTGCTATTC GCAGTGAAAG GGGCAGCGGT TCGCGTACGT
GGTAATTTCG ATTTGGTGTC GCGTGAGAAC GCGCTGCTTG CTAACAACGT GCTTCTGATT
GCTGCGCTAG TCGTCGTATT GGTTGGTACC TTGTTGCCAT TGGTTCACAA ACAAATTGGT
CTTGGTTCAG TATCTATCGG TGCACCATTC TTCGACATGC TGTTCGCATG GCTAATGGTG
CCGTTTGCCT TCCTATTAGG TATTGGTCCT ATGATTCGCT GGAAGCGCGA CAATCTATCT
AAGCTTGTTA AGCCAATGAT TGTTTCTGGT GTGCTTGCTT TCGCATTGGC TGCAGTATGC
GTGTTCCTAT TCGCTGACTT CTTCTCAGTG ATGGCCTACA TCGGTTGGGT GATGGCTATC
TGGATCATTG CAATGCATGG CTTTGAGTTG TACGAGCGTG CTACGCACCG TCACAGTTTC
GGCGAAGGTG TTCGTAAACT TCAACGTAGC CACTGGGCAA TGATGCTAGG TCACATCGGT
CTTGCGGTTA CCGTGATTGG TATTGCGATG GTGCAAAACT ACAGCATCGA ACGTGATGTA
CGCTTAGCAC CAGGTGAGCA CTTCAAGATT TACGGTTACG ACTTCTACTT CTCAGGCCTA
CGTGACAAAG ACGGTCCAAA CTACGATGGT TACATCGCGG ACTTCGAAAT CACCAATGAT
GGTAAATACG TGAACACGCT ACACGCTGAA AAACGTTTCT ACCGCACGGC GAAGTCAATG
ATGACAGAAG CGGCCATCGA CCGCGGCATC ACTCGTGACC TCTATATCGC AATGGGTGAG
CGTCTAGACG ACAACCGTTC TTGGGCAGTA CGTATTTACT ACAAACCATT CGTTCGTTGG
ATCTGGGCTG GTTCATTGAT CATGTCTTTA GGTGGTGCGC TTGCTATTTC TGATAGACGT
TACCGCTTCC GCAAAACGGC TAAGAAAGAC GAAAAGTCAA AGCTAGCGGA GAAGGAGGCA
TAA
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| Protein sequence | MIAEIGHFAL ILSLAMALLL SVLPLWGASN NNTMLMNTAR PLSWSMFVML FFSFVILCWG
FYTNDFTLQY VASNSNSQLP WYYRLTAVWG AHEGSLLLWV LIQAAWTVAV ATFSRGMPQE
SVARVLAVMG MISVGFLLFI ILTSNPFLRT LPFFPVDGRD LNPLLQDPGL IVHPPMLYMG
YVGFSVAFSF AIASLMTGRL DTAWARWSRP WTTAAWVFLT LGIALGSWWA YYELGWGGWW
FWDPVENASF MPWLAGTALM HSLAVTEKRG TFKAWTVLLA ISAFSLSLLG TFLVRSGILV
SVHAFASDPS RGMFILGFLV FVIGGSLLLF AVKGAAVRVR GNFDLVSREN ALLANNVLLI
AALVVVLVGT LLPLVHKQIG LGSVSIGAPF FDMLFAWLMV PFAFLLGIGP MIRWKRDNLS
KLVKPMIVSG VLAFALAAVC VFLFADFFSV MAYIGWVMAI WIIAMHGFEL YERATHRHSF
GEGVRKLQRS HWAMMLGHIG LAVTVIGIAM VQNYSIERDV RLAPGEHFKI YGYDFYFSGL
RDKDGPNYDG YIADFEITND GKYVNTLHAE KRFYRTAKSM MTEAAIDRGI TRDLYIAMGE
RLDDNRSWAV RIYYKPFVRW IWAGSLIMSL GGALAISDRR YRFRKTAKKD EKSKLAEKEA
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