Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03087 |
Symbol | |
ID | 5553639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3110393 |
End bp | 3112603 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640908568 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_001446263 |
Protein GI | 156975356 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTATT TAGCTTTAGC GCGAAAATGG CGTCCTAACA AGTTTGATCA AGTCGTCGGG CAGAACCATG TTCTGACGGC TCTAGAGAAC GCGTTAGCGC AAAATCGCTT ACACCATGCG TACCTATTTA GCGGTACGCG AGGCGTTGGT AAAACGTCGA TTGGCCGACT GTTTGCTAAG GGCCTGAACT GTGAAACGGG GATTACTGCT AACCCTTGTG GTGAGTGTGA TACCTGTCGT GAGATTGATG AAGGTCGCTT TGTTGACCTA TTAGAGATCG ATGCAGCTTC TCGTACTAAA GTTGAAGACA CTCGTGAACT GTTAGACAAC GTTCAATACA AACCTGCTCG TGGACGTTTT AAAGTGTACC TCATCGATGA GGTACACATG CTTTCGCGTC ACTCTTTCAA TGCGCTGTTA AAAACGCTTG AAGAGCCGCC TGAGTATGTG AAGTTCTTGT TGGCTACGAC GGATCCACAA AAACTGCCAG TGACGATTTT GTCGCGCTGT TTGCAGTTCC ACCTCAAGCC AATCAGTGTT GATGATATTC ATCAGCAACT TGACCATATT CTGGAAAAAG AACAAGTTTC TGCAGAAGCA AGAGCACTTG GCATGATCTC GCACGCTGCA GATGGCAGTA TGCGTGATGC ACTTAGCCTT ACTGACCAAG CTATCGCCCT AGGTAACGGT ACGATTCAAA CCGATATCGT AAGCCATATG CTTGGGACGA TCGATACTGA CCAAGCGATT CACTTGCTGG AATCGATCAG CAGTAAGCAA CCTCAACAGG CGATGGACAA AATCCAGCAA CTTGCATCAA ACGGTGTGGA GTGGGATGGA TTGTTACAAC AATTGGCATC GCAGCTTCAC CGTGTCGCGA TGTACCAAGC TCTGCCATCG ACCTTGGATC AGGCTCAACC TGATGCTGAA AAAATCGAAT TATTGAGTAA AGCTCTCACG CCACAAGATG TTCAGCTTTA CTACCAAATT GCTTTAAAAG GGCGTGAAGA TCTGACGTTG TCACCTAATG GTCGCGTCGG TATGGAAATG ATTGTATTGC GTATGATGGC ATTCCGCCCA TCAGCCAGTA ACGGTGCAAA CGTAATTTCG ACGTCATCAC AGCCACAAGT CGCGCCAGCT GCGAGTACGA GTCAGCCAAA AGCGGCTCCA CAGCAGCCAT CTCAACAGAC ATCATCTCAA CAGACATCAT CGCAACAGCA ACCAGTGTCT CAAGCGCCTG CACAGCGAAT GCAAAGTCGC CCGATGACAT CGGCACCGCA ACAACAAGCC GTATCTCAGC CAACGAGCCA GCCAGCGGCC CATAATCCAG CTACGATGAA TGAAGCGCCA CAGTACCAAC CTGAATATCA GGGTGGCTAC GACATGGCTC CACAATATGA TATGGCACCA CCAATGAGTG AGAACCCTGT ACCAACGCAG CAAGCTCCTC AACAGGCTCA GCTACAAGAG AGTGCGCCGG CACCAGCTCG CAGTAACTTG AGTGGCCTGC GCCACCAATT ACGCTCACAG CGCCAGGGAC AGCAACAGCA ACAAGCACCT GGACAAAGTG GTGGTCCAAA AAAGTCTAAC GCGACATCTG CACAAAAAGA ATCGGTTATT GACCGTCTAG CGCAATTGCA TGGCAATTCC GCGCAGGTGT CGCCTAAGTC TGCTCCTCAA GCTGAAAAAC AAGCTCCAGA GGATGAAGCG TACCGTTGGC GACCAACCAA ACCGGTTGAA AAGAAAGCCA ATACGCAATT GACACCTACG CAGCTCAAGC AAGCGCTAGA GCATGAAAAG ACGCCAGAAA TGGCGCAAAA ACTGGTTGAT GAATCACTAG AGAAAAGCGA GTGGGCGAAC CTGATTAGCA AGATGGATAC GCCTAAGTTG GTTGAACAAC TTGCATTAAA CTCGCATTTC AACAAAGAAG GCTCGACAGT TTCGCTACAA TTAAGAGGCA GTCAGGCACA CTTGAACACC GACAGAGCGC AAAGTGAGCT GCACAGTGCA CTGAACCATG TGTTGGGTGA AGAGTGTCAT CTGAGTATTG ATGTTAGCGA AAGTGGTGAG ACGCCACTAG AGTTGAGAGA TAGACTCTAC CAAGAGAAAT TACAGCAAGC GCTGAACAGT TTAGAAAACG ATCCGCACGT ACAATTCATC GAGCGCCGTT TCGCAGCAGA GCTTGATAAA GATAGTGTAC GTCCTATCTA A
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Protein sequence | MSYLALARKW RPNKFDQVVG QNHVLTALEN ALAQNRLHHA YLFSGTRGVG KTSIGRLFAK GLNCETGITA NPCGECDTCR EIDEGRFVDL LEIDAASRTK VEDTRELLDN VQYKPARGRF KVYLIDEVHM LSRHSFNALL KTLEEPPEYV KFLLATTDPQ KLPVTILSRC LQFHLKPISV DDIHQQLDHI LEKEQVSAEA RALGMISHAA DGSMRDALSL TDQAIALGNG TIQTDIVSHM LGTIDTDQAI HLLESISSKQ PQQAMDKIQQ LASNGVEWDG LLQQLASQLH RVAMYQALPS TLDQAQPDAE KIELLSKALT PQDVQLYYQI ALKGREDLTL SPNGRVGMEM IVLRMMAFRP SASNGANVIS TSSQPQVAPA ASTSQPKAAP QQPSQQTSSQ QTSSQQQPVS QAPAQRMQSR PMTSAPQQQA VSQPTSQPAA HNPATMNEAP QYQPEYQGGY DMAPQYDMAP PMSENPVPTQ QAPQQAQLQE SAPAPARSNL SGLRHQLRSQ RQGQQQQQAP GQSGGPKKSN ATSAQKESVI DRLAQLHGNS AQVSPKSAPQ AEKQAPEDEA YRWRPTKPVE KKANTQLTPT QLKQALEHEK TPEMAQKLVD ESLEKSEWAN LISKMDTPKL VEQLALNSHF NKEGSTVSLQ LRGSQAHLNT DRAQSELHSA LNHVLGEECH LSIDVSESGE TPLELRDRLY QEKLQQALNS LENDPHVQFI ERRFAAELDK DSVRPI
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