Gene VIBHAR_03070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03070 
Symbol 
ID5553549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3091926 
End bp3096311 
Gene Length4386 bp 
Protein Length1461 aa 
Translation table11 
GC content47% 
IMG OID640908552 
Producthypothetical protein 
Protein accessionYP_001446247 
Protein GI156975340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAA CCATCGGCGC TAATGGGCTG AGTATTGTAC ATAAAGGCTC AGGCGGTGAA 
GCGAACGCTT CTGTGCCGGA CGTTTGTTTA ACCAAAGTCG GAAAGCCTGT TGTTCCTATT
CCGTACGGCA ATAACGCTAA ATCCGCCGAT TTGGTGGACG GCTCAACCAG TGTCACTGCC
GATGGTGGCA ACAGTATTGC CTTGCAAGGC AGTAAGTTCT CAAAAAGTAC AGGTGATGCC
GCTGGCGATA AAAAAGGCGT GAGTTCAGGA ACCATTGAAG GAGAAGCGCA GTTTGTGACG
TCTTCTCCGA ATGTCCTTAT CGAAGGAAAA GGAGTGGCAC GCCAAAGTGA TCAAATGACC
ATGAACAATG GCAACACCAT GTGTTTTGGC GTACAGAACC CATCTTTCTC GGTCGAAGAA
GATCTTGAAG AGACCTTTAT CATGGACGTT TGCGTGCGTC ACCCAAACGG TCAACGGCTG
GTGAATGCGC CATTTAAACT CAGTGATGAG CAAGGTTCGA CGGTATATGA AGCCACTTTG
GATGATAAAG GGCGCAGTGA TGCCGACCCG CTCAAAGGTG GCAAGGTCAA ACTGCTGGTC
GAAGAGAGTC AAGACCCGTT TGTGGTGGCT CCGATTCGTC GCGATAACCC TCGCCATCTA
GACAGCCAAT CGGATGATGA TTTTTTCAAT ATCGCTTCCA AAGGTCAGCG CGGCTTTTGG
CAGCCAACCA GAATTGAGAC CGTTGGCACG GCTTGGGGCA GTATTGGGCA AACGTTGAGT
AGCGATCGTT ATTTCCAAGA CATGGTCAGT GCTGAGGTCA TTCAGCACTT TACCCATTAT
CACCCTGATA CAACATTCGA TGTATCAAAG ACCTGTGAGG CTCTTATTGG CAACCTTGAT
CAACCCTTGC CGCATACCAC TGAATCGCTG CTCGCTTACA CCCTGCCTCA AGTTCTAGAA
GAAGGAGAAC TACTGTCGGT ACTGCTGAGG CTAGCCCCGC ATGAGACCAC CGACCGAATG
CTGGCGTACA TGCGTGCGCG AGGTAAAGGC AACCCACAAA CCTATTTGGC TGACTACGAT
TGGCAAGCGG CAGAAAAGAG CATCAATAGT GAACTCGACG CGCTGCTTAA CAAGCTGAAA
AGTCGGTTAA CCTTCTTACG TGATGAAGCC AGCAAACTGC AATACGCGTA CCTGTCTGAG
GATGTGTTCG ATAAGCACAT CGATACGTTA AGCTCGTACA TGAAGCTACT ACCCGACCTC
ATTTCAGGTG TCTTCAGTAA AATGCAAACC AAAGCCAGCG AGCTTCTGGC GAACACAGAT
GACGTAAAGG TCATCAAAGC GGCAGACGAC TTACACTCGA TTGAGAGTGA ATCGATTGAA
GCCGTTGTCA ACACCACGAA AACCATCGAC ACGGTCGAGC CATTTATGAA CGAAGTGGCT
GGTGTGATTG AGAATGTCAT TCCGATTTAT CCGGTGCGTT ATGGCTACGC GAATTTCTTT
GACGAATTGA TGCCAGCGCA AGCCCCGCCA AGCATGTTAG AAATGAATGG TGCTACCGGG
CTGAAAGACA CCGGTGGCTA CCTGCTTCGC CTTCTACGTG AGGGTTGGTT GTACATCAAA
GAAGAGAGCG AAGAAGAGAC CGCGCCTTTC CACATCTTCA AATACGCGCA AACCCAAACG
CCGACCGGTG TGATTGAAAA GTTTGAGAAA TACTATTTCA CCAATGAAGA AAACGCTCAA
GAGGGATTAA CACTCGATAC CTCATCGGGT TCCACGTTCT ATCCTTTTGC GTTTGTGACG
CCGAAAGCGA AAAAAATCTC CATCGCTTAC TCTGAGCACG AATGGTCTGC CGCCATCATT
GATAACATGA ACGGCGATGA AGAGTTGCGT AAAAAAGCGA TGCAGCAGGT GGACTTGAGT
ACGCCGCAAA CCGAGTTTAG CCAAGCGGCA ACGCAAGACA ACCTCAGCAC CTTGGTGGAA
GATTACCGCA ATAACGATGA AAAGTGGTTG GCAGACAAAG ACAGCGCGAA ACCTATGGCA
CACGGGCTTG ATCTCGCCAC TACCACACTA AGTTATCACC TTACGACTGA AGGCATTGTA
GAAACCATGC AAAAAAGCCA TAGCGAGCAT AAAGACGGCA CATTGGTGGC TTTGTTTGAC
CCAGTTGGTC GTCAACGTGA TATCTCAAAA GTTATCTCGA AAAATGTCGC TGAGCAACAA
GCCTATGTCA ATGTCAACAA ATACCCTTTG ACGATTGGTC AGTACGCACA GTCATGTCTT
GAGAGTGATA TTCCAGAAAT CAAGAAAGCT GCGGAGGAAA ACCTTGATAC GGAAAGGCTC
TCAATATTTT TGACAGATTA TCAAGATGAA ATCAGCAAGA AAAAGAAAGA ACGCAAGCAG
TTACTTGAAT TGATGGACTA CTTTGTTGCG GGTCAAGGCG CTGAAGATGA GGTTGGCTCG
CTTACTTGCT ATCTAAGACA CTACTTTGAT ATTCGTCAGC AAGGCATTAT CGACCCTGCT
GCTGAGATGG GGAAATTGCT GCTCCTTCTT GGATCGCTTT TTGAAGGCGT AACCGCAAGC
GAAGAAGGCA TTGAAGACAT GGATAGATGG GTTGGTGAAG CCTTTCATAC AGAAGAACTC
ACCCCATTAG ATAAGGTGTG GGGAGTTTCT TTAAAGGCCA TTCAGATCGT ATTTCTTCAG
CCTCAAGATC AAATAAATTG GCATCATGCT GTTCCTCCTG TATTAACTTC GATAGGTAAT
TACTTGGCTC GTATACAAGC TGAGTTCACT TATGGCACTA AGTTACTGGG AAATTCTGGG
TTAGAGTGCT TTTATAGAGC AACCTTACCA TCATTATTTG ATGCCTTATT AGGGGTTCGG
TTTACGGGGA ATCGACTCAA CATGGCGCTC GATGACATCG AAAACTTAAT CGATAAACAA
ACAGGTCAAA AAAGCTCAAT CAAATCAAAC GTGCACTTTG GCGAAAAGCT GCTCAATTGG
TCTGAAATGA AAGCAAACCA ATCAGAGCAA CGTATTTTTG AATTACTGGA AGCAGAGCCA
ACAGCATCAG CGCCTGAATG GCTCAAAAGG CTGGCCGATA AGCTCCCTAC CAAAACACTT
CTCCATTTCG CACAAGAAAG TGCAGGTTTA GGGCTGACCT ATTGGTCGTA TCAAGCAAAT
GTGAATACCA TCAATGATCT TTTGTCTCAA ACACAATTCG ATACACTCGA CCCCGTGAAT
GATGACAAAG AATATACATA TCGCACGGTA AAAATGTTGT CCACGCTCGC GGCGATCACC
GCAGACAGTA TTACTCTCAG CCAGTACAGT GCCAAGGGAG TAAATATTGC AGCACGTGAA
GCTGAAAGGG CGCTTCTTGC CCTTCAAAAG CAGTTACCGA ATATGAGTAA GCAGTTAGCT
GAAAAGCTCG GAGTGCGCAG TTTACAAGCT TACAGTCAGC GTCTAGATAC GCGCCTGACA
GCAGCGCCGA TAAAAGGACT TGTTGTCGGT GCAAACGTGG CAATGTCATT TGTTTACTTC
TGGGATGCCT TTACTAGTCG CAGGTCAGGC AATAAACAAG CTTATCTGGG CTATCGGATC
GGTGGCGTCT CCAGTCTATT GGTTGCACTT TCGGCCATCG GGGGGCCGGT TGGAGCCGTA
TTACTCGCCG TTGGTCTTAC GGGGCTTTTA TTTAGTGCAT ATCAGATTGG CCGATATGGA
AAAAATAGTT TCGAAAACTT GCTCTACAGC TCTTTCTGGG GGACCAGTAA GTATTATCCG
TTTTGGAGTG ATTTTAAAAA ACAAGAAGAC ATTGATACTG TTCAAGAGAG GATAGATGTT
ATCACCGATG TGGTATCTAA TAACAACAAG GCTGTGACAT CTGATAACAT TAAGTACTTT
GATGCGGCAT TGAACATCGA GTCTCAGGAG TTTTTAAACT ATTTTTACGC ACCAAAACTC
ACTATTGTGG ACAGCAGTAT TCGTCCATAT GGCTCAGAGC CATATCGATA CAATCTCAGT
TACGTATTCG TCTTGCCGGA TTTTAAAATG AACGTATCTC AACTGCATGG TTCGATTTAT
CGTGAATTGG ATGACGCTAA ATACGCGGCT TACTCAGTAC CTGAGCCCGA TAAGGCCATG
ACCGAAACCT TCAGGAGTGC GTTGGCGGCG GCATTTGAAG ATAGGACGTT ATGTATCGCC
AAAGAAGACG GTCTGCATGT CACGGTCAAT GTCGAGTTTT CGCACCCAGC TCGCCTGATC
TGGTGTTACG AACCGACACC AAACACTGTT GTACCAAAAC GCTATTTAAC CAACAGCGGC
TACATAAGCA CGAGTCAAAT AGGCATGCTT GATGAAAAAC CAAACACTAC ACCTTGGGGA
AAATAA
 
Protein sequence
MASTIGANGL SIVHKGSGGE ANASVPDVCL TKVGKPVVPI PYGNNAKSAD LVDGSTSVTA 
DGGNSIALQG SKFSKSTGDA AGDKKGVSSG TIEGEAQFVT SSPNVLIEGK GVARQSDQMT
MNNGNTMCFG VQNPSFSVEE DLEETFIMDV CVRHPNGQRL VNAPFKLSDE QGSTVYEATL
DDKGRSDADP LKGGKVKLLV EESQDPFVVA PIRRDNPRHL DSQSDDDFFN IASKGQRGFW
QPTRIETVGT AWGSIGQTLS SDRYFQDMVS AEVIQHFTHY HPDTTFDVSK TCEALIGNLD
QPLPHTTESL LAYTLPQVLE EGELLSVLLR LAPHETTDRM LAYMRARGKG NPQTYLADYD
WQAAEKSINS ELDALLNKLK SRLTFLRDEA SKLQYAYLSE DVFDKHIDTL SSYMKLLPDL
ISGVFSKMQT KASELLANTD DVKVIKAADD LHSIESESIE AVVNTTKTID TVEPFMNEVA
GVIENVIPIY PVRYGYANFF DELMPAQAPP SMLEMNGATG LKDTGGYLLR LLREGWLYIK
EESEEETAPF HIFKYAQTQT PTGVIEKFEK YYFTNEENAQ EGLTLDTSSG STFYPFAFVT
PKAKKISIAY SEHEWSAAII DNMNGDEELR KKAMQQVDLS TPQTEFSQAA TQDNLSTLVE
DYRNNDEKWL ADKDSAKPMA HGLDLATTTL SYHLTTEGIV ETMQKSHSEH KDGTLVALFD
PVGRQRDISK VISKNVAEQQ AYVNVNKYPL TIGQYAQSCL ESDIPEIKKA AEENLDTERL
SIFLTDYQDE ISKKKKERKQ LLELMDYFVA GQGAEDEVGS LTCYLRHYFD IRQQGIIDPA
AEMGKLLLLL GSLFEGVTAS EEGIEDMDRW VGEAFHTEEL TPLDKVWGVS LKAIQIVFLQ
PQDQINWHHA VPPVLTSIGN YLARIQAEFT YGTKLLGNSG LECFYRATLP SLFDALLGVR
FTGNRLNMAL DDIENLIDKQ TGQKSSIKSN VHFGEKLLNW SEMKANQSEQ RIFELLEAEP
TASAPEWLKR LADKLPTKTL LHFAQESAGL GLTYWSYQAN VNTINDLLSQ TQFDTLDPVN
DDKEYTYRTV KMLSTLAAIT ADSITLSQYS AKGVNIAARE AERALLALQK QLPNMSKQLA
EKLGVRSLQA YSQRLDTRLT AAPIKGLVVG ANVAMSFVYF WDAFTSRRSG NKQAYLGYRI
GGVSSLLVAL SAIGGPVGAV LLAVGLTGLL FSAYQIGRYG KNSFENLLYS SFWGTSKYYP
FWSDFKKQED IDTVQERIDV ITDVVSNNNK AVTSDNIKYF DAALNIESQE FLNYFYAPKL
TIVDSSIRPY GSEPYRYNLS YVFVLPDFKM NVSQLHGSIY RELDDAKYAA YSVPEPDKAM
TETFRSALAA AFEDRTLCIA KEDGLHVTVN VEFSHPARLI WCYEPTPNTV VPKRYLTNSG
YISTSQIGML DEKPNTTPWG K