Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03041 |
Symbol | |
ID | 5553779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3062365 |
End bp | 3064329 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640908523 |
Product | DNA topoisomerase III |
Protein accession | YP_001446218 |
Protein GI | 156975311 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGTC TGTTTATTGC TGAAAAACCA AGTTTAGGCC GTGCGATTGC GGCTGCACTG CCAAATCCTC AAAAGAAAGA TCAAGGCTTT ATCCGCTGTG GTAATGGCGA TGTGGTGACT TGGTGTATTG GCCACTTGTT GGAGCAAGTC GAACCAGATG CTTATGACGA ACGCTACAAA AAATGGAATA TGGCAGACTT GCCGATTGTC CCACAGCAGT GGCAGCTGAG ACCGCGAAAA AGCGCCAGCA AACAGCTCAC GGTAATACGT AAACTCCTCA AAGATGCGAC AGAAGTTATC CACGCAGGAG ACCCCGACCG AGAGGGACAA TTGTTGGTGG ATGAGGTATT GGATTACTGC AAGCTTTCCA AAACCAAAAA AGAAGCCACA CAACGCCTAC TGATCTCTGA CTTGAACTTA CCTGCGGTCA AGCGTGCCTT GAGCTCGATG CGCAGTAATC GCGACTTCAT ACCTCTTTCT GTTTCAGCTC TGGCGCGTTC TCGCGCTGAT TGGCTTTATG GAATGAACAT GTCTCGCGCC TATACCTTGT TGGGCCAAAA AGCGGGCTAT CAAGGTGTCT TATCAGTAGG GCGAGTTCAA ACTCCGGTAC TTGGCTTGGT GGTTCGCCGC GATGAAGAAA TCGAAAACTT TGTACCGAAA GATTACTTCA CTCTGCATGC TTTAATTCCT TATCAAGATC AAAATGGCGC ATTTGATATT CGCGCTCGTT GGAAACCAAG TGAAGCTTGT AAGCCTTGGC AGGACGAAGA AGGACGGGTA TTGAGCAGAA AGTTGGTTGA GAACGTAGCA AACCGCATAG CCAATCAACC TGCCAAAGTG ACCGAGTCTG AACAGAAGCA AACCAAGCAA TCAGCACCGC TTCCGTATTC GTTATCCGCA CTGCAGATTG ATGCGGCAAA ACGCTATGGC ATGAGTGCTC AGCAGGTATT GGATACTTGT CAGGCGCTGT ATGAAAAGCA TAAGCTCATT ACGTACCCAC GTTCGGACTG TCGTTACTTA CCATTGGAGC ATTACTCGCA AGCAGGCTCT GTTACATCGG CTATCGCTAA CAATGCCAAA GAACTACAAA GCGCAGTTCA AGGTGCAGAC TTATCGATTA AGTCCAAGGC GTGGAACGAC AAGAAAGTCG ATGCCCACCA TGCGATCATT CCAACGCCGA AGCAGGCAAA TGTGAATGCG TTATCTGGCA ATGAGATGAA GGTTTATCAA CTGATTGCTC GTCAATACTT GATGCAATTT TATCCAGCGG CGGTATATGC CGAGGCTAAA TTGGTGTTTG ATATTGCTGG TGGTACATTT ATCGCCAAAG GTCGCCAACT GGTTTCTCCA GGCTGGAAAG CGTTAATGGG AAAAACGGAT AAAGAAGACG ATGGCATTGA TGCTGTCCCG CCGCTCGCAG AAGGCACGGT GTTGACCTGC CGAGAAGGTG AAATCAAAGA CCGTAAGACT GAACCGCCAA AGCACTTTAC AGAAGCAACA CTGCTTCAGG CCATGACGGG TATTGCTCGT TATGTTGCAG ACAAAGAACT GAAGAAGATC CTGCGCGACA CCGATGGCTT AGGAACAGAA GCGACTCGAG CCGGTATTCT GGATACGCTT TTTAAGCGTC AGTTGCTGAC TCGTCAGGGT AAATCAATTT TGAGCTCACC AGCGGGGCGA GGCTTGATTC ATGCCCTACC AATGGATGCG ACCTATCCTG ATATGACGGC GCACTGGGAA CACCAGTTGC AAGGAATGGC AGAACGAAAT CAAGCGTATC AGCCTTTCAT GCAAGCGTTA GAGCAGCGCA TTGATGGATT AATGGGCGAA GTGAAATCGG GCCCGATTCC TGATTCGTTA CGTCATTTGC CTAAAGTCGA GCGTCCGGCA TTCAAACGTG AAAAACGCAG CTATTCGAAG GGCGGAGCAT CGAAATCAAG CTCAGGTAAG CGGCAGTCTT CATAA
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Protein sequence | MSRLFIAEKP SLGRAIAAAL PNPQKKDQGF IRCGNGDVVT WCIGHLLEQV EPDAYDERYK KWNMADLPIV PQQWQLRPRK SASKQLTVIR KLLKDATEVI HAGDPDREGQ LLVDEVLDYC KLSKTKKEAT QRLLISDLNL PAVKRALSSM RSNRDFIPLS VSALARSRAD WLYGMNMSRA YTLLGQKAGY QGVLSVGRVQ TPVLGLVVRR DEEIENFVPK DYFTLHALIP YQDQNGAFDI RARWKPSEAC KPWQDEEGRV LSRKLVENVA NRIANQPAKV TESEQKQTKQ SAPLPYSLSA LQIDAAKRYG MSAQQVLDTC QALYEKHKLI TYPRSDCRYL PLEHYSQAGS VTSAIANNAK ELQSAVQGAD LSIKSKAWND KKVDAHHAII PTPKQANVNA LSGNEMKVYQ LIARQYLMQF YPAAVYAEAK LVFDIAGGTF IAKGRQLVSP GWKALMGKTD KEDDGIDAVP PLAEGTVLTC REGEIKDRKT EPPKHFTEAT LLQAMTGIAR YVADKELKKI LRDTDGLGTE ATRAGILDTL FKRQLLTRQG KSILSSPAGR GLIHALPMDA TYPDMTAHWE HQLQGMAERN QAYQPFMQAL EQRIDGLMGE VKSGPIPDSL RHLPKVERPA FKREKRSYSK GGASKSSSGK RQSS
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