Gene VIBHAR_03021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03021 
Symbol 
ID5553456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3041410 
End bp3042597 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content47% 
IMG OID640908503 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001446199 
Protein GI156975292 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGAAAA TTGAACTATG GAGAAAGTTT CAAAAATATA CATGGAGAGT TAATGCGATG 
AGAGTAGGTT TAGTTGGTTG GCGCGGCATG GTCGGTTCGG TACTGATGCA GCGTATGGTC 
GAAGAGAAAG ATTTCGACTT AATTGAGCCA GTTTTCTACA GCACGTCTCA AATAGGTATC 
CCGGCCCCCC TTTTTGCTAA CAATCAGGTA GGTAAAGAAG CTGGTCTACT TCAAGATGCG 
TTCGATATTG ACAGCTTAAA ACAGCTTGAT GCAGTGATTA CGTGTCAAGG TGGTGGTTAC 
ACAGAGAAAG TTTACCCAGC ACTACGCCAG GCTGGCTGGA AAGGCTACTG GATTGATGCA 
GCATCTACAC TGCGTATGGC AGAAGATTCT ATCATCACTC TAGACCCGGT AAACCTAGCG 
CAAATTCAAC AAGGCATTCA CGGTGGTACC AATACGTTTG TTGGTGGTAA CTGTACAGTA 
AGTTTGATGC TGATGGGCCT TGGTGGTCTG TTCGAGAAAG GCTTAGTTGA GTGGACAAGT 
GCAATGACGT ACCAAGCGGC GTCTGGCGCA GGTGCACAAA ACATGCGTGA GCTGATCTCT 
CAGATGGGCG TAATCAACGA CTCTGTAAGT TCTGAATTGG CAAACCCAGC AAGTTCTATT 
CTGGATATCG ATAAAAAAGT TGCGGATACA ATGCGCAGCT CTTCATTCCC AACCGATAAG 
TTTGGTGTGC CGCTAGCGGG CTCTTTGATT CCTTGGATCG ACGTTAAACG CGACAACGGT 
CAGAGCAAGG AAGAATGGAA AGCAGGTGTA GAAGCGAACA AGATCCTTGG CTTCCAAGAT 
GCGCCAGTGC CAATTGATGG TACGTGTGTT CGTATCGGTG CGATGCGTTG TCACTCCCAA 
GCATTGACTA TCAAGCTTAA GCAAAACGTG CCAATGGATG AAATCGAAGA AATCATCGCG 
ACGCACAACG ATTGGGTGAA AGTGATTCCG AATGATCGTG ACATCACCGC TCAAGAGCTA 
ACGCCGGCAA AAGTAACTGG CACGCTTTCT ATTCCTGTTG GTCGTCTACG TAAGATGGCA 
ATGGGTGATG ATTTCCTAAA CGCGTTCACT GTAGGTGACC AGCTTCTATG GGGTGCTGCA 
GAGCCACTAC GTCGTACTCT ACGAATCATC CTTGCTGAGA AAGCGTAA
 
Protein sequence
MSKIELWRKF QKYTWRVNAM RVGLVGWRGM VGSVLMQRMV EEKDFDLIEP VFYSTSQIGI 
PAPLFANNQV GKEAGLLQDA FDIDSLKQLD AVITCQGGGY TEKVYPALRQ AGWKGYWIDA 
ASTLRMAEDS IITLDPVNLA QIQQGIHGGT NTFVGGNCTV SLMLMGLGGL FEKGLVEWTS 
AMTYQAASGA GAQNMRELIS QMGVINDSVS SELANPASSI LDIDKKVADT MRSSSFPTDK 
FGVPLAGSLI PWIDVKRDNG QSKEEWKAGV EANKILGFQD APVPIDGTCV RIGAMRCHSQ 
ALTIKLKQNV PMDEIEEIIA THNDWVKVIP NDRDITAQEL TPAKVTGTLS IPVGRLRKMA 
MGDDFLNAFT VGDQLLWGAA EPLRRTLRII LAEKA