Gene VIBHAR_02946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02946 
SymboloppD 
ID5555782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2970085 
End bp2971059 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content48% 
IMG OID640908428 
Productoligopeptide transporter ATP-binding component 
Protein accessionYP_001446126 
Protein GI156975219 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGTT TATTAGATGT CAAAGATCTG CGCGTCGAAT TTACCACGCA AGATGGTATC 
GTAACCGCAG TAAACGATTT GAACTTCTCT CTGAATCAAG GTGAGACCCT AGGTATCGTA 
GGTGAGTCTG GTTCAGGTAA GTCACAAACT GTATTCGCAA TCATGGGTCT ACTGGCTAAG 
AACGGTATTA TCTCTGGTAG TGCGAAATTC GAAGGTAATG AGATTCTTAA CCTTCCAGAA 
AAAGAGCTGA ACAAGGTTCG TGCGGAACAG ATCGCTATGA TCTTCCAAGA CCCAATGACG 
TCTCTTAACC CGTACATGAA AGTGAGCGAT CAGCTGATGG AAGTATTGAT GCTGCACAAA 
GGTATGGGTA AAGCAGAAGC GTTCGAAGAG TCGGTTCGCA TGCTTGAAGC GGTAAAAATC 
CCAGAAGCTC GTAAGCGTAT CACCATGTAC CCACACGAGT TCTCGGGTGG TATGCGTCAG 
CGTGTAATGA TCGCAATGGC GCTGCTGTGT CGTCCAAAAC TGCTTATTGC GGATGAGCCA 
ACGACGGCAT TGGACGTTAC GGTTCAAGCG CAGATCATGG ATCTGCTGAA CGAACTGAAA 
TCTGAGTTCA ACACTGCAAT CATCATGATC ACGCACGACC TTGGTGTTGT TGCGGGTTCA 
TGTGACAAAG TGCTAGTGAT GTACGCAGGT CGTACCATGG AGTACGGCAC TGTGAACGAA 
ATCTTCTACA ACCCAAGCCA CCCTTACGCG GAAGGTCTAT TGAAGGCGAT TCCTCGTCTG 
GATACAGAAG GCGAGATTCT ACCAACGATT CCTGGTAACC CGCCTAACTT GCTTCGTCTA 
CCACCTGGCT GTCCTTACCA AGATCGCTGC CACCGTGTGA TGGATCGTTG TAAGCGTGAA 
GCACCGATTC TGACACCGTT TGGTGATGGC CGTCAGCGTG CATGTTTTTC TGAATGGGAG 
GCTTGGAGCA AATGA
 
Protein sequence
MMSLLDVKDL RVEFTTQDGI VTAVNDLNFS LNQGETLGIV GESGSGKSQT VFAIMGLLAK 
NGIISGSAKF EGNEILNLPE KELNKVRAEQ IAMIFQDPMT SLNPYMKVSD QLMEVLMLHK 
GMGKAEAFEE SVRMLEAVKI PEARKRITMY PHEFSGGMRQ RVMIAMALLC RPKLLIADEP 
TTALDVTVQA QIMDLLNELK SEFNTAIIMI THDLGVVAGS CDKVLVMYAG RTMEYGTVNE 
IFYNPSHPYA EGLLKAIPRL DTEGEILPTI PGNPPNLLRL PPGCPYQDRC HRVMDRCKRE 
APILTPFGDG RQRACFSEWE AWSK