Gene VIBHAR_02900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02900 
Symbol 
ID5555931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2920269 
End bp2921699 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content48% 
IMG OID640908382 
ProductPTS system glucose-specific transporter subunits IIBC 
Protein accessionYP_001446080 
Protein GI156975173 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR02002] PTS system, glucose-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGA ACCTTTTTGC AAACCTGCAA AAAGTTGGTA AAGCTCTGAT GCTACCAGTA 
TCAGTGTTGC CAGTCGCAGG TATCCTACTA GGTGTTGGTG CTGCCCATCT AAGCTTCATT
CCAGAGGTTG TATCTAACCT AATGGAACAA GCTGGTGGTT CAGTATTCGG CCAAATGGCA
CTTCTATTTG CTGTTGGTGT AGCTCTAGGC TTCACGAACA ACGACGGTGT AGCTGGTCTA
GCTGCTATCG TTGGTTACGG CATCATGACA GCAACGCTAG GCGTTATGGC TGGCATCATG
GGCGTTGAGA AAATCGACAC AGGTGTACTA GGTGGTATCC TTGTCGGTGG TGTTGCTGCT
TGGGCATTCA ACCGTTTCTT CAAAATCCAA CTTCCAGAGT ACCTTGGCTT CTTCGCTGGT
AAGCGTGCAG TGCCAATCAT CACTGGTTTC GCTGCGATCT TCCTTGCAGT TGTTCTTTCT
TTCGTATGGC CACCAATCGG CGGTGCAATC TCTGCATTCT CTGACTGGGC TGCACACCAA
AACCCACAAC TTGCGTTCGG TATCTACGGC GTAGTTGAGC GTTCTCTAAT CCCATTCGGT
CTACACCACG TATGGAACGT ACCATTCTTC TTCGAAGCAG GTACTTGTGT GAACGCTGCT
GGTGAAACGC AAAACGGCGT ACTAACTTGT TACCTAGTTG CTGATGAAGC TTCTCGTGCT
GCTGGTAATG GCTTCGGTCA GCTAGCGGGT GGTTACATGT TCAAGATGTT CGGTCTACCA
GCTGCAGCAA TCGCAATTGC TCACTGTGCT AAACCTGAAA ACCGCGCGAA AGTAATGGGT
ATCATGGCGT CAGCTGCTCT GACTTCATTC CTAACAGGTA TTACTGAGCC AATCGAATTC
TCATTCCTAT TCGTTGCTCC ACTACTATAC GGTATCCACG CTCTACTAGC TGGTTCTGCG
TATGTTGTTG CTAACACGCT AGGCTTTGTA CACGGTACAT CATTCTCACA CGGTCTGATC
GACTTCCTAG TTCTATCTGG TCACGCTCAG AAGATGGGTC TGATGGTAGC TGTTGGTCTA
GTTTACGCAG TAATCTACTA CGTAGTATTC CGCACAGTAA TCACTGCTCT TGACCTTAAA
ACACCAGGTC GTGAAGACGA ATCTGAAGAA GCTGCTGCAA CTTCTGGTTC TGACATGGCA
GGTGAGCTTG TTGCAGCATT CGGCGGCAAA GCAAACATCA CTGGTCTAGA CGCATGTATC
ACTCGTCTAC GTGTAGCAGT AGCTGACACA GCTGCAGTTG ACCAAGACAA ACTAAAACAA
CTAGGCGCTG CTGGTGTTGT AGTTGTAGCA GGTGGTGTTC AGGCTATCTT CGGTACTAAG
TCTGACAACC TGAAAACTGA AATGGATGAG TGGATTCGTA ACCACGGCTA A
 
Protein sequence
MFKNLFANLQ KVGKALMLPV SVLPVAGILL GVGAAHLSFI PEVVSNLMEQ AGGSVFGQMA 
LLFAVGVALG FTNNDGVAGL AAIVGYGIMT ATLGVMAGIM GVEKIDTGVL GGILVGGVAA
WAFNRFFKIQ LPEYLGFFAG KRAVPIITGF AAIFLAVVLS FVWPPIGGAI SAFSDWAAHQ
NPQLAFGIYG VVERSLIPFG LHHVWNVPFF FEAGTCVNAA GETQNGVLTC YLVADEASRA
AGNGFGQLAG GYMFKMFGLP AAAIAIAHCA KPENRAKVMG IMASAALTSF LTGITEPIEF
SFLFVAPLLY GIHALLAGSA YVVANTLGFV HGTSFSHGLI DFLVLSGHAQ KMGLMVAVGL
VYAVIYYVVF RTVITALDLK TPGREDESEE AAATSGSDMA GELVAAFGGK ANITGLDACI
TRLRVAVADT AAVDQDKLKQ LGAAGVVVVA GGVQAIFGTK SDNLKTEMDE WIRNHG