Gene VIBHAR_02835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02835 
Symbol 
ID5553225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2855448 
End bp2856731 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content51% 
IMG OID640908317 
Producthypothetical protein 
Protein accessionYP_001446015 
Protein GI156975108 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTAC CAATGAGGCA AATCTTTCAG GAAATGGCAG CAGAAAAGCT GCGTTTGGGA 
TTGACCATTC TTGCCGTTGC GTGGGCGACC CTATGTATCG CTGCCATGCT GGCGGTGGGC
GAGGGCATTC GCCAAGGCGT ATTAAGAACA GCACAAGATG GTAACGGGAA CCTGATATAC
TTAACCGGAG GCATGGCGAC CGTCGATTAT GGCGTGTTCC ACCAAGGTAA GTTTCTCACC
TTAAAAACCG ACGATACCGA CGTAATAAAA GCCCTGCCAG AGGTGAAAAG TGTTGCACCC
ACCGCAATTT GGAATGAGCG CATTACTGTG GGCGACCGAG GCTCATGGCA AGAACCATTA
GCCGTCACCA CAGATTTTGC GTCAATGACC AATCTAACCC CAATGGATGG CGGACGTTGG
CTCAATCCAC TTGATCAAAA AGAGATGCGT AAAGTCGTTG TGCTGGGCTA TTCACTGGCT
GCGGACTTGT TTAATCCTAA TGAAGACTTC AGCTGGTTTG CCCCCGTGAC ACTGCAAACC
AATCCTGTCG GCGAAAAGGT CAAGATTGGC AGTGAAGAGT TCACCGTAAT TGGTGTGTTG
AAGAAGAACA GCGCCGAAGT TGAGCAGGGT GACCAAATCA ACTATTCCAG CTTTGTGCCT
TTAGCCACAT GGCAACGCTT TCATACTAAC GGCGATATCG GAGGCATCAA CGTCGAGCCG
CAAGCTCATG CTGATCGTGA AAAACTGGCA AAGACCATTC GCCAAGTGAT CGCGCGTAAA
CACGGCGCCA GTGTGAGTGA TGAGCAAGTT GTCCAAGTGG AAGACATGTT CCTTAAACAG
AAAAGCATGC AGCAGTTCTT GATTGGCTTA CAAAGCTTTC TTGGCATCAT CGGCTTTGTC
ACGCTGGCTG TGGCGGGCGT AGGAATTGCG AATGTCATGT ACGCGACCGT AAAACGTTCC
ACCCGAGACA TCGGTGTGCG CATGGCAGTT GGTGCCACGC CTACAGCCAT TCGTCTTCAC
TACCTAGTGC AATCACTGAT GACCATGATG CTCGGCGGTG TGCTGGGGCT AGGTGTGACG
TACACGCTTG TATCGGCCAT CAGCGCCATA AACCTAGAAG GCAACACCTT TTATGAACGC
CTTGGGAAAC CGGTCCCTGA GCTCTCTTGG ATAGTCGTTG CAATTGTAAT TACCACCTTG
GTGTTTATTG GCGTCGCTTC TGCATGGCTG CCTGCAAACC GCGCCGCAAA AGTGAGCCCG
TTGGAGGCAC TGCAAAGTGA ATAA
 
Protein sequence
MLLPMRQIFQ EMAAEKLRLG LTILAVAWAT LCIAAMLAVG EGIRQGVLRT AQDGNGNLIY 
LTGGMATVDY GVFHQGKFLT LKTDDTDVIK ALPEVKSVAP TAIWNERITV GDRGSWQEPL
AVTTDFASMT NLTPMDGGRW LNPLDQKEMR KVVVLGYSLA ADLFNPNEDF SWFAPVTLQT
NPVGEKVKIG SEEFTVIGVL KKNSAEVEQG DQINYSSFVP LATWQRFHTN GDIGGINVEP
QAHADREKLA KTIRQVIARK HGASVSDEQV VQVEDMFLKQ KSMQQFLIGL QSFLGIIGFV
TLAVAGVGIA NVMYATVKRS TRDIGVRMAV GATPTAIRLH YLVQSLMTMM LGGVLGLGVT
YTLVSAISAI NLEGNTFYER LGKPVPELSW IVVAIVITTL VFIGVASAWL PANRAAKVSP
LEALQSE