| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02753 |
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| Symbol | |
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| ID | 5555915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 2776314 |
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| End bp | 2777252 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640908235 |
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| Product | 16S rRNA uridine-516 pseudouridylate synthase |
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| Protein accession | YP_001445934 |
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| Protein GI | 156975027 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA AGTTACAAAA AGTATTAGCA CGTGCTGGAC ACGGTTCTCG TCGTGAGATC
GAATCGTTAA TTAAATCTGG TCGCGTTAGC GTGAACGGAA TCGTAGCTAA ACTTGGTGAA
AGACTGGAAG ATGAGAACAG CGTAGTTCGT ATCGATGGTC ACGTTGTGTC TGCTAAGGCG
CAAGAAGAAG TGATCTGTCG TGTTTTGGCT TACTACAAGC CAGAAGGTGA ACTATGTACT
CGTCACGACC CTGAAGGTCG TCGCACTGTT TTCGATCGCC TGCCAAAGAT CCGTGGTTCT
CGTTGGATTT CAGTTGGTCG TCTTGATGCA AACACATCAG GTCTACTGCT GTTTACAACA
GATGGTGAAC TGGCGAACCG CCTAATGCAC CCAAGCCGTC AGGTTGAACG TGAATATCTT
GTTCGTGTTT TCGGCGAAGT CACTGAACAA AAAGTGAAAA ACTTGGTTCG TGGTGTTGAG
CTTGAAGATG GCATGGCACG TTTCGAAGAT GTGGTATATG CGGGTGGTGA AGGTATGAAC
CACACGTTTT ATGTTGCTAT CAACGAAGGT CGTAACCGTG AAGTTCGTCG TCTGTGGGAA
TCTCAAGACA CGACGGTTAG CCGCCTAAAA CGTGTTCGTT ACGGTGACAT CTATCTGGAT
AAGAAACTGC CTCGTGGTGG TTGGATGGAA CTTGATCTGA AAGAAGTAAA CTACCTACGT
GAATTGGTAG AACTTCGTCC AGAAAAAGAA ACCATGCTGG ATCTGAACAA AGACAACACG
TCACGTAAGC GTGAACGTGC TCGTAGCCAA AAAATCCGTC GCGCAGTTAA GCGTCACGAA
GAGCGCGTAA ATACACCGAA AGGTCGCAGC AACAATCCTT CTCGTCGTAA GCCGAAGAAG
ACTGCGGGTG ACCAAGGTGC ACGTAACAAG CATCGTTAA
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| Protein sequence | MSEKLQKVLA RAGHGSRREI ESLIKSGRVS VNGIVAKLGE RLEDENSVVR IDGHVVSAKA
QEEVICRVLA YYKPEGELCT RHDPEGRRTV FDRLPKIRGS RWISVGRLDA NTSGLLLFTT
DGELANRLMH PSRQVEREYL VRVFGEVTEQ KVKNLVRGVE LEDGMARFED VVYAGGEGMN
HTFYVAINEG RNREVRRLWE SQDTTVSRLK RVRYGDIYLD KKLPRGGWME LDLKEVNYLR
ELVELRPEKE TMLDLNKDNT SRKRERARSQ KIRRAVKRHE ERVNTPKGRS NNPSRRKPKK
TAGDQGARNK HR
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