Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02654 |
Symbol | |
ID | 5554342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2674024 |
End bp | 2675226 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640908139 |
Product | bicyclomycin/multidrug efflux system |
Protein accession | YP_001445842 |
Protein GI | 156974935 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAA AAGCCCAAAG TGCTCCCCAG TCACAAATCA GTTTTTTATT GTTTCTTGTA CTCGGTGCAA TTGGTGCGTT GACGCCACTT GCTATCGATA TGTACCTACC AGCTATGCCA ACCATCGCGA AAGATCTTGG TGTAACCCCA GGTGCGGTAC AGATTACGTT AACGGCTTAT ACGGCAGGTT TTGCAATAGG TCAGTTGATT CATGGTCCGT TAGCGGATAG CTATGGTCGC CGACCTGTAC TCATTTTAGG TGTGCTCTTT TTTGGTTTGG CAGCGGCAGT CAGTGCGACC ACTAACGGTA TCGATGCGCT AACTTATGTG CGTACGGCGC AAGGTTTTGC TGGTGCGGCA GCGGCTGTGA TTATCCAAGC GGTTGTACGA GACATGTTTG ACCGTGAAGA TTTCGCGCGT GCTATGTCGT TCGTGACCTT GGTGATTACG ATTGCGCCTT TGGTAGCGCC GATGATTGGT GGTCATCTAG CGATTTGGTT CGGCTGGCGT TCGATCTTCT GGGTACTCGC TATCTTCGCT GTTGTAGTGA TTCTGCTTGT TCTGTGGATG ATCCCAGAAA CGCTTAAGCC AAAAAAACGT CAGCCACTAA GATTCAGAAC CACGATTCGT AACTATGCGC GCCTGTGTTC TAACCCTGAG GCATTGGGTT TAATGCTTTC AGGTGCGTTC TCGTTCTCTG GTATGTTTGC ATTCCTGACT GCGGGTTCGT TTGTTTATAT TGATTTATAT GGTGTTCGAC CTGACCAATT TGGTTACCTA TTTGGTTTGA ACATCGTAGC GATGATCATC ATGACCAGTC TAAATGGTCG CATGGTGAAA AAGGTCGGTT CGCACTTCAT GCTACGTTTC GGACTAACCG TGCAGTTGAT TGCGGGTATT GGCCTGTTTG TCGGCTGGAT GCTCGACCTT GGCTTGTGGG GCATGGTGCC TTTTGTTGTG CTGTTTATCG GCACTTTGTC TACGATTGGT AGTAACTCAA TGGCTCTGTT GTTGAGTGGG TACCCAACCA TGGCGGGTAC AGCATCTTCA CTTGCAGGTA CACTGCGATT TGGCACTGGC TCATTGGTTG GTGCGCTCGT TGCTGCAATG CCAGGCGCTG TTGCGTGGCC GATGATCATC GTAATGTTTG CTTGTTCAGT GCTGTCTGCA CTGTTTTATT GGACTTTAGG AAGAAAGGCG TAA
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Protein sequence | MTEKAQSAPQ SQISFLLFLV LGAIGALTPL AIDMYLPAMP TIAKDLGVTP GAVQITLTAY TAGFAIGQLI HGPLADSYGR RPVLILGVLF FGLAAAVSAT TNGIDALTYV RTAQGFAGAA AAVIIQAVVR DMFDREDFAR AMSFVTLVIT IAPLVAPMIG GHLAIWFGWR SIFWVLAIFA VVVILLVLWM IPETLKPKKR QPLRFRTTIR NYARLCSNPE ALGLMLSGAF SFSGMFAFLT AGSFVYIDLY GVRPDQFGYL FGLNIVAMII MTSLNGRMVK KVGSHFMLRF GLTVQLIAGI GLFVGWMLDL GLWGMVPFVV LFIGTLSTIG SNSMALLLSG YPTMAGTASS LAGTLRFGTG SLVGALVAAM PGAVAWPMII VMFACSVLSA LFYWTLGRKA
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