Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02583 |
Symbol | |
ID | 5555920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2601137 |
End bp | 2602651 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640908068 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_001445771 |
Protein GI | 156974864 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGAGA ATTTGAAGAA CTTTATTCAA GGAGAAATGC AAATGATGAT TTCAAAAGAG ATTAGTGCCT CTCCTGACAG TGCTCAGTGG CAATCCATAA ACTGGAAAGC CGTTGAATCC CATGTTTTAA AGCTTCAGAT GCGTATTGCA AAGGCAACAC GAGAAGGTAA ACACGGCAAA GTGAAAGCAT TGCAGTGGAT ACTGACTCAC TCGCGCTCAG CAAAACTTCT TGCTGTTAAG CGGGTGTCAC AAAACAAAGG CAGTAAAACG CCTGGAATTG ACGGCGTTAT CTGGAATACA GATACGCGCC GCATGAAAGC AGCCAATCAA TTGAGCAGAA AAGCTTATCA AGCAAAACCG CTCAAGCGTA TCTACATCCC CAAGAAAAAC GGCAAGCTCA GACCACTGGG TATCCCGTGT ATGATCGATA GAGCGCAGCA AGCGCTTCAT CTTCTTGCAC TAGAGCCAGT ATCAGAAACA CTTGCCGACC CTAACAGCTA TGGATTTAGA CCAAACCGAA GCACTGCTGA TGCTATTGCG CAGTGCTTCA AGTGCTTGGC TATGAAACGC TCTGCTCAAT GGGTTCTTGA GGGTGACATC AAAGCTTGTT TCGATAAGAT CGGACATCAA TGGCTGATGG ATAACATTGC CATCGATAAA CGTATGTTGG AACAATGGTT AAAGTCTGGT TTTATGGATA AAGGCTTGTT CTATCGCACT GACGAGGGAA CGCCACAAGG TGGGGTCATA TCCCCAACCT TGATGCTAAT GACTCTTACA GGGCTTGAGC AACGCATAAA GTCTACCGCA CTCAAAAAGG GTGCAAGAGC CAACTTTATT GGATACGCCG ACGATTTCGT CGTCACTTGT GCTTCAAAGG AAGTGCTGGA GAACGATATC AAACCGTTGA TTGCTGATTT CTTAACAGAA AGAGGCTTAA CACTCTCCGA AGAGAAAACG CACATTACCC ACATCAGCAG AGGTTTTGAT TTCCTAGGTT TTAATCATAG GAAGTACAAA GGGAAGTTGC TCATTAAACC GAGCAAATCC AACACACTAC TGTTCTTGAG TAACTTGCGT GAACTCATCA AAAAGCACGC AACCATCCCT GTGAACGATC TTATCAAGTT GATAAACCCG AAACTCAGGG GCTGGTCGAA TTACTATCGA CACTGCGTTG CGAAACAGGT ATTCGGATAT GTAGGTCACA AGCTATTCCA TGCGTTATGG CATTGGGCTA AAAGGCGTCA TCCAACAAAA TCTAGAACTT GGATCGCCCT TAAATACTTC ATCAACCGTC AAGGTCAATG GCAATTTCAC GGTTGGCAGA AGATCATGAA TATGGATTGT CAGTTCAATC TGTTTCAAAT AGCTAAGGTG CCAATAGAGA GGCATGTGAA AATCAGGAGT GCCGCTACAC CTTTTGATCC TCAATACCAA GAATACTTGG CTAAGAGAAA ATCAAAGAAG CAATGCCGTA ACTCTTGGTA TGAACCTGCT CTCACTGCTT TATAA
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Protein sequence | MQENLKNFIQ GEMQMMISKE ISASPDSAQW QSINWKAVES HVLKLQMRIA KATREGKHGK VKALQWILTH SRSAKLLAVK RVSQNKGSKT PGIDGVIWNT DTRRMKAANQ LSRKAYQAKP LKRIYIPKKN GKLRPLGIPC MIDRAQQALH LLALEPVSET LADPNSYGFR PNRSTADAIA QCFKCLAMKR SAQWVLEGDI KACFDKIGHQ WLMDNIAIDK RMLEQWLKSG FMDKGLFYRT DEGTPQGGVI SPTLMLMTLT GLEQRIKSTA LKKGARANFI GYADDFVVTC ASKEVLENDI KPLIADFLTE RGLTLSEEKT HITHISRGFD FLGFNHRKYK GKLLIKPSKS NTLLFLSNLR ELIKKHATIP VNDLIKLINP KLRGWSNYYR HCVAKQVFGY VGHKLFHALW HWAKRRHPTK SRTWIALKYF INRQGQWQFH GWQKIMNMDC QFNLFQIAKV PIERHVKIRS AATPFDPQYQ EYLAKRKSKK QCRNSWYEPA LTAL
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