Gene VIBHAR_02524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02524 
Symbol 
ID5553830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2548685 
End bp2550424 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content47% 
IMG OID640908010 
Producthypothetical protein 
Protein accessionYP_001445713 
Protein GI156974806 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT TTTGGCAGCT ACGTTGGTAT TTCCAACTAA AGTGGAAGCA GTATGTGGGG 
TCAATCCTAC TATTTGCCGT CATTTCCGCC CTTCAGCTTG TCCCTCCCAA AGCGGTCGGC
ATTATTGTTG ATGGCGTGGT CGATAATACC CTCGAAACCA GTACCTTAGT GATGTGGTTA
TTAGGACTTA TCGTGCTATT TTTTGCAATA TATGGCTGTC GAATTCTATG GCGGATATGG
TTATTTGGCG CGAGTTGGGA ATTAGGCACT ATTTTGCGTA ATCGCCTCTA TCGTCATGTC
TCTACTCAGC CCCCTCGATT CTTTGAACGA TACAAAACCG GCGACCTAAT GGCTCGTGGT
ACGAACGATG TGCGCAACAT TGTCATGACT GCTGGTGAAG GCGTTTTGAC CGCAGCCGAC
TCTCTGATCA CTGGTATCGC TGTACTGATC ATCATGGTGA CGCAAATCAG TTGGAAGCTA
ACCGCAATGG CACTATTGCC GATGCCGTTT CTTGCCATCA TTATCTTCTT CATCGTACGT
ATTCTGCATA AACGATTCAA AATCGCACAA GAAGCCTTCT CTACGATGTC AGACATGACT
CAAGAGTCAC TAAATGGCGT GCGTATGCTG CGTGCTTTTG GGTTAGAAAA CCAAGAGCAG
CAACGTTTTG AAGAGGTTGT CGATGATACG GGTGAGAAGA ACATCGCCGT TGCTCGTGTC
GATGCACGCT TCGACCCAGC GATTCAGCTG ACCATCGGCA TGTCTTTCTT TTTGAGTGTT
GCTTCTGGTG CCTACTTAGT TGACCAAGGT GATATCACAC TCGGGGATTT GACCGCCTTT
ACTATGTATT TGGGCCTTAT GATCTGGCCG ATGCTGGCAT TCGCATTCCT ATTTAATATC
TTGGAAAGAG GCTCTGCTGC GTGGAACCGT CTGCAAGAAA TCTTCGACGA GAAGCCAGAG
ATCGTCAGTG GTGAAACGCC ATTAGGCACT CAACCTTTAC CTTTGCAGAT CAAGATTGAC
GAATTCCACT GGCCTAAAGA GCTGCCACCA GCACTAACTG ATGTTCACAT CACCCTTGAG
CCAGGAAAAA TGCTCGGCAT TGCGGGACCT GTCGGTAGTG GTAAATCCAC GTTACTAACC
TTACTGCTTC GCCAACACGA TATGGATAAC GGTACGATTC AATTTGGTGA TGTCAAAATT
AAGGACGCAG TTTTGCCAGA GTGGCGAGAG CGTTTCGCAG TGATTAACCA AAGCCCGTTC
TTGTTCTCTA AATCTATCTT TGAAAACATT GCTCTGGGCA ACCCTAGCGC ATCAAAAGAA
GACGTTTATC GAGCAGCCAA ACTGGCTTGT ATTCACGACG ATATTGAGAA GTTTCCTGAA
GGCTATCAAA CAGAAGTGGG TGAAAAAGGC ATCACCCTCT CTGGTGGTCA GAAACAACGT
ATCGCTATTG CACGCGCTAT GCTGCTCAAT GCCCAAGTAT TGGTATTGGA TGATGCCCTG
TCTGCTGTGG ATGGTCGTAC CGAGCACCAG ATTCTAAAGA ACTTAGAAAC TTACTACCGT
GAGCAGTCAT TGATTGTTAT TGCCCACCGC CTCACTGCTC TGGAAGCAGC AGAAGAGATT
GTGGTGCTCA ATCACGGACA CATTGCCGAG CGCGGCCAGC ATGGGACACT TCTGGAACGT
CAGGGGTGGT ATGCGGAAAT GTACCAGTAC CAAAAACTAG AACAGGCAAT GGAGGACTAA
 
Protein sequence
MRIFWQLRWY FQLKWKQYVG SILLFAVISA LQLVPPKAVG IIVDGVVDNT LETSTLVMWL 
LGLIVLFFAI YGCRILWRIW LFGASWELGT ILRNRLYRHV STQPPRFFER YKTGDLMARG
TNDVRNIVMT AGEGVLTAAD SLITGIAVLI IMVTQISWKL TAMALLPMPF LAIIIFFIVR
ILHKRFKIAQ EAFSTMSDMT QESLNGVRML RAFGLENQEQ QRFEEVVDDT GEKNIAVARV
DARFDPAIQL TIGMSFFLSV ASGAYLVDQG DITLGDLTAF TMYLGLMIWP MLAFAFLFNI
LERGSAAWNR LQEIFDEKPE IVSGETPLGT QPLPLQIKID EFHWPKELPP ALTDVHITLE
PGKMLGIAGP VGSGKSTLLT LLLRQHDMDN GTIQFGDVKI KDAVLPEWRE RFAVINQSPF
LFSKSIFENI ALGNPSASKE DVYRAAKLAC IHDDIEKFPE GYQTEVGEKG ITLSGGQKQR
IAIARAMLLN AQVLVLDDAL SAVDGRTEHQ ILKNLETYYR EQSLIVIAHR LTALEAAEEI
VVLNHGHIAE RGQHGTLLER QGWYAEMYQY QKLEQAMED