Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02524 |
Symbol | |
ID | 5553830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2548685 |
End bp | 2550424 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908010 |
Product | hypothetical protein |
Protein accession | YP_001445713 |
Protein GI | 156974806 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAT TTTGGCAGCT ACGTTGGTAT TTCCAACTAA AGTGGAAGCA GTATGTGGGG TCAATCCTAC TATTTGCCGT CATTTCCGCC CTTCAGCTTG TCCCTCCCAA AGCGGTCGGC ATTATTGTTG ATGGCGTGGT CGATAATACC CTCGAAACCA GTACCTTAGT GATGTGGTTA TTAGGACTTA TCGTGCTATT TTTTGCAATA TATGGCTGTC GAATTCTATG GCGGATATGG TTATTTGGCG CGAGTTGGGA ATTAGGCACT ATTTTGCGTA ATCGCCTCTA TCGTCATGTC TCTACTCAGC CCCCTCGATT CTTTGAACGA TACAAAACCG GCGACCTAAT GGCTCGTGGT ACGAACGATG TGCGCAACAT TGTCATGACT GCTGGTGAAG GCGTTTTGAC CGCAGCCGAC TCTCTGATCA CTGGTATCGC TGTACTGATC ATCATGGTGA CGCAAATCAG TTGGAAGCTA ACCGCAATGG CACTATTGCC GATGCCGTTT CTTGCCATCA TTATCTTCTT CATCGTACGT ATTCTGCATA AACGATTCAA AATCGCACAA GAAGCCTTCT CTACGATGTC AGACATGACT CAAGAGTCAC TAAATGGCGT GCGTATGCTG CGTGCTTTTG GGTTAGAAAA CCAAGAGCAG CAACGTTTTG AAGAGGTTGT CGATGATACG GGTGAGAAGA ACATCGCCGT TGCTCGTGTC GATGCACGCT TCGACCCAGC GATTCAGCTG ACCATCGGCA TGTCTTTCTT TTTGAGTGTT GCTTCTGGTG CCTACTTAGT TGACCAAGGT GATATCACAC TCGGGGATTT GACCGCCTTT ACTATGTATT TGGGCCTTAT GATCTGGCCG ATGCTGGCAT TCGCATTCCT ATTTAATATC TTGGAAAGAG GCTCTGCTGC GTGGAACCGT CTGCAAGAAA TCTTCGACGA GAAGCCAGAG ATCGTCAGTG GTGAAACGCC ATTAGGCACT CAACCTTTAC CTTTGCAGAT CAAGATTGAC GAATTCCACT GGCCTAAAGA GCTGCCACCA GCACTAACTG ATGTTCACAT CACCCTTGAG CCAGGAAAAA TGCTCGGCAT TGCGGGACCT GTCGGTAGTG GTAAATCCAC GTTACTAACC TTACTGCTTC GCCAACACGA TATGGATAAC GGTACGATTC AATTTGGTGA TGTCAAAATT AAGGACGCAG TTTTGCCAGA GTGGCGAGAG CGTTTCGCAG TGATTAACCA AAGCCCGTTC TTGTTCTCTA AATCTATCTT TGAAAACATT GCTCTGGGCA ACCCTAGCGC ATCAAAAGAA GACGTTTATC GAGCAGCCAA ACTGGCTTGT ATTCACGACG ATATTGAGAA GTTTCCTGAA GGCTATCAAA CAGAAGTGGG TGAAAAAGGC ATCACCCTCT CTGGTGGTCA GAAACAACGT ATCGCTATTG CACGCGCTAT GCTGCTCAAT GCCCAAGTAT TGGTATTGGA TGATGCCCTG TCTGCTGTGG ATGGTCGTAC CGAGCACCAG ATTCTAAAGA ACTTAGAAAC TTACTACCGT GAGCAGTCAT TGATTGTTAT TGCCCACCGC CTCACTGCTC TGGAAGCAGC AGAAGAGATT GTGGTGCTCA ATCACGGACA CATTGCCGAG CGCGGCCAGC ATGGGACACT TCTGGAACGT CAGGGGTGGT ATGCGGAAAT GTACCAGTAC CAAAAACTAG AACAGGCAAT GGAGGACTAA
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Protein sequence | MRIFWQLRWY FQLKWKQYVG SILLFAVISA LQLVPPKAVG IIVDGVVDNT LETSTLVMWL LGLIVLFFAI YGCRILWRIW LFGASWELGT ILRNRLYRHV STQPPRFFER YKTGDLMARG TNDVRNIVMT AGEGVLTAAD SLITGIAVLI IMVTQISWKL TAMALLPMPF LAIIIFFIVR ILHKRFKIAQ EAFSTMSDMT QESLNGVRML RAFGLENQEQ QRFEEVVDDT GEKNIAVARV DARFDPAIQL TIGMSFFLSV ASGAYLVDQG DITLGDLTAF TMYLGLMIWP MLAFAFLFNI LERGSAAWNR LQEIFDEKPE IVSGETPLGT QPLPLQIKID EFHWPKELPP ALTDVHITLE PGKMLGIAGP VGSGKSTLLT LLLRQHDMDN GTIQFGDVKI KDAVLPEWRE RFAVINQSPF LFSKSIFENI ALGNPSASKE DVYRAAKLAC IHDDIEKFPE GYQTEVGEKG ITLSGGQKQR IAIARAMLLN AQVLVLDDAL SAVDGRTEHQ ILKNLETYYR EQSLIVIAHR LTALEAAEEI VVLNHGHIAE RGQHGTLLER QGWYAEMYQY QKLEQAMED
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