| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02509 |
|---|
| Symbol | |
|---|
| ID | 5554444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2530040 |
|---|
| End bp | 2532061 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640907995 |
|---|
| Product | protease |
|---|
| Protein accession | YP_001445698 |
|---|
| Protein GI | 156974791 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3227] Zinc metalloprotease (elastase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAACG TCACTTTATT ATCGCTGGTC CCTTTCGCGT TCGCCTCGCA GGCAGCACAA
ATTGTGGAAC ACTCTCAAAC TGACATCTCT GAAGCACTCA ATATTGCTGG TAAATCATCC
TACATGCCAG CAAGTACCGA ACTGAGCTAT CAAAACATCA ACCGAGTAGA AATTGGCCAA
CAAACGCTCG TTCGTAAACA GCAGTTGCAT TACGGCGTAC CTGTTTACGG CCATTCTGTC
GTCGCAGATC TTTCCGCAAA AGGCTTTGCT CAATCGATTG ACGGCAATGT CGTGGTTGGA
ATCGATAACG ACTTGGACTC AACGCTACCG ATGATCAGTG CTAACCAAGC GATTGAGATC
GCAACGGGTA CTGAGCAAGG TTTTGCATCT AACGAGTCTC CAGAGAATGA TGCTCGTGCG
GAACTAATGG TTTGGCTCGA CGAACAAAAT ACCGCGCACC TTATCTACAA AGTCGATGCG
GTTAAGATTG TGAATCTGCG TCCTTCTCGT CCTATCACGC TGGTTGATGC AAAATCAGGC
GAGATCATGG ACCAATGGGA AGGTCTTGCA TTTCTTGAGG CAGAAGGCCC TGGCGGCAAC
CAAAAAAGTG GTCGTTATTA CTTTGGCCCA AATACTAAGT TTGGTGGATT TCAAGTCGAC
CAATACTGTC AGATGAACAG TGATAACGTC GAAACGATCA ACATGAACAA CCAACAATGG
GGTGGTCAAG TTCATCGCTT CAACTGCAAC GTGAATAACT ACCGAGAAAT CAACGGGGCA
TACGCGCCAA TGAATGACGC ACACTACTTC GGCCAACGTG TGTTTGACAT GTACCGTGAG
TGGCTTGGCG CACGTCCTAT TCAACAAAAA CTCACCATGC GCGTTCACTA CGGCTCAAAC
TATGGCAACG CGTTTTGGGA TGGCCGTCAG ATGACCTTTG GTGATGGCAA CAGCTATATG
TACCCTCTTG CGACTTGGGA TGTTATCGCA CATGAAGTCA GCCACGGTTT TACCGAGCAA
AACTCAGGGT TGGAATATCG CGGCATGTCT GGCGGAATGA ACGAATCATT TTCTGACGTC
GCTGCTGCTG CACTTAGCCA ATACGTGCAT GGTAGCTTCA ACTGGAAAAT GGGTGAACAC
GTGATGAAAT ACTCGCCAGC AATGCGTTAC TTCATCAACC CAAGTCACGA TGGTGCTTCA
ATTGGTCACG TGAATCAATA CTACCGTGGC ATCGATGTTC ACCACAGCTC TGGTATTTTC
AACAAAGCCT TTTACCACCT TGCGACAAGC TCAGGCTGGA GCATCAAAAA AGCATTCATG
GCTTACGCAA CGGCGAACCA GTTGTACTGG ACGCCAAACT CAACCTTCCA GCAAGGTGCA
GAAGGCGTAT GCAAGGCAGC GCAAAAGCTG GGATATGAAA GCTCTGCTGT CACGTCTGCG
TTCTCTCAAG TGGGTGTTCA GGTGATGAAC TGTGAAAGCG GTCAACCTAA TCCAAATCCA
AACCCTGGGC CGGATACAGG CATGAACGAG CTTTCTCTCA ACATGCCTGT TGCGATCCAA
AGCAACGCGG CTGGCGAGCA ACAGTTCGTT CTGCGCAGAA CCTCTAGCGA TGATGTTTGG
GTGCAAACTT ACAATGGCTT TGGTAATGTG GAACTTTATG TAGCGATTGA TCGCCCAGCA
ACACCTTCAG ATTACGACTG CTCATCGACC AATATGGGTA ATGAAGAAGC GTGTGGTTTT
GGTGGTATTC AAGGTTCAGA CATTTATGTC ACTGTAACAA ATACGCAGAG CGCCTCTGAC
GCCTACCTTG CCGTCAGTGA GACATACGGA ACGCCACAGC CAAACCCAGA GCCACAAGAC
CAGTGCGCGT CTCTGCAAGA GTGGTCACCT TACAACTACT ACCCTGCTGG TTCTTCAGTG
AAGTATTGGG GCAACCGCTT TGTTGCGACA CAAGACAACT GGGGAGCAGA CCCTTTTCAG
AACTACTGGT TCTGGACATT TGAAGGCAGC TGTAACGACT AA
|
|---|
| Protein sequence | MRNVTLLSLV PFAFASQAAQ IVEHSQTDIS EALNIAGKSS YMPASTELSY QNINRVEIGQ
QTLVRKQQLH YGVPVYGHSV VADLSAKGFA QSIDGNVVVG IDNDLDSTLP MISANQAIEI
ATGTEQGFAS NESPENDARA ELMVWLDEQN TAHLIYKVDA VKIVNLRPSR PITLVDAKSG
EIMDQWEGLA FLEAEGPGGN QKSGRYYFGP NTKFGGFQVD QYCQMNSDNV ETINMNNQQW
GGQVHRFNCN VNNYREINGA YAPMNDAHYF GQRVFDMYRE WLGARPIQQK LTMRVHYGSN
YGNAFWDGRQ MTFGDGNSYM YPLATWDVIA HEVSHGFTEQ NSGLEYRGMS GGMNESFSDV
AAAALSQYVH GSFNWKMGEH VMKYSPAMRY FINPSHDGAS IGHVNQYYRG IDVHHSSGIF
NKAFYHLATS SGWSIKKAFM AYATANQLYW TPNSTFQQGA EGVCKAAQKL GYESSAVTSA
FSQVGVQVMN CESGQPNPNP NPGPDTGMNE LSLNMPVAIQ SNAAGEQQFV LRRTSSDDVW
VQTYNGFGNV ELYVAIDRPA TPSDYDCSST NMGNEEACGF GGIQGSDIYV TVTNTQSASD
AYLAVSETYG TPQPNPEPQD QCASLQEWSP YNYYPAGSSV KYWGNRFVAT QDNWGADPFQ
NYWFWTFEGS CND
|
|---|
| |