Gene VIBHAR_02398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02398 
Symbol 
ID5556099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2407902 
End bp2408621 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content44% 
IMG OID640907884 
Producthypothetical protein 
Protein accessionYP_001445587 
Protein GI156974680 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAG AATTGAAAAC TCGTCATAAA GTGATTGTCT CTGAGAAGGA GCACACTAAA 
TCTGAATCGC TGACCGAATC GTTAGTGGAA GCGATTGTGA GTGGTGAAAT TGAACCGGGC 
AGTAAAATCT CAGAGCCTGA ATTAGCCAAG AAATATCAGG TGAGTAGAGG TCCTTTGCGT 
GAAGCCATGA TGCGCCTAGA AGGACTTGGG TTGATTGAGC GCATTCCGCA TGTTGGTGCT 
CGCGTTATCA CTTTCTCTCC AGAAAAACTC ATAGAATTGT ATTCCGTTCG CGAAGCATTA 
GAGGGCATGG CTGCCAGACT TGCGGCTCGC CATATCACTC AAGAAGAATT ACTGAGTTTG 
GAAATGCTAT TGTCGACACA TTCCAAACAC ATCGATGAAG TTGAAGGGGC TTCTTACTTC 
CACCAGCATG GTGACTTCGA CTTCCATTAT CGAATCATTC AAGCGAGCCG AAACAGCAAG 
CTTATCTCTT TACTTTGCGA CGAACTGTAT CACTTGTTGC GCATGTATCG TTATCAATCA 
CCACGTGCGC AATCTCGTCC TAATGAAGCT CTCAATGAAC ACAAATTCAT TCTGCAAGCG 
ATTCGCAACC GTGATGAAGA GTTGGCAGAA ATGCTGATGA GAAGGCACAT CTCAGGCAGC 
CGAAAACTTA TCGAATTACA GATTCTACAT TCTGAAAGTA AAGATAGAGA ACAAGACTAG
 
Protein sequence
MNTELKTRHK VIVSEKEHTK SESLTESLVE AIVSGEIEPG SKISEPELAK KYQVSRGPLR 
EAMMRLEGLG LIERIPHVGA RVITFSPEKL IELYSVREAL EGMAARLAAR HITQEELLSL 
EMLLSTHSKH IDEVEGASYF HQHGDFDFHY RIIQASRNSK LISLLCDELY HLLRMYRYQS 
PRAQSRPNEA LNEHKFILQA IRNRDEELAE MLMRRHISGS RKLIELQILH SESKDREQD