Gene VIBHAR_02396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02396 
Symbol 
ID5556062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2405720 
End bp2406862 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content48% 
IMG OID640907882 
Productmethylcitrate synthase 
Protein accessionYP_001445585 
Protein GI156974678 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCATT CTGTAGAAAA CAAAGCTGAG ATAGGCGGCG CAGGTCTACG CGGTCAAAGC 
GCTGGAAGCA CAGCTTTATG CACTGTCGGT AAAACGGGGA CAGGTCTAAC GTATCGTGGT 
TACGATATCA CGGACTTGGC AAATCATGCT CAATTTGAAG AGGTGGCGCA TTTGCTGTTA 
CGCGGTCACT TACCTAATCA ACAAGAGCTA GACGCCTACA AGACACATCT ATTGAGCTTG 
CGCGGCTTAC CAGCGGAGCT TAAGCAATCG TTAGAGCTGA TTCCTGCTGA TGCTCACCCG 
ATGGATGTTA TGCGCACAGG TTGCTCTATG CTGGGTAATT TAGAGCAAGA AATGGACTTT 
GAGCAACAGC TCCATGCTAC TGAGCGAATG CTGGCGCTGT TCCCTGCCAT CATCTGTTAC 
TGGTATCGAT TCAGCCATGA TGGTGTGCGA ATCAAAACGC ACGATAACAG TGAAGACTGC 
ATTGGCGGCT ACTTCCTAAA ACTGCTTACC GATAAAGCAC CAAGTGAAAC GCACATAAAG 
GTGATGCACT GTTCTTTGAT TCTTTATGCA GAGCATGAGT TTAATGCCTC AACATTTGCA 
GCGCGCGTGT GTGCTTCTAC GCTTTCTGAT CTTCATTCTT GTATTACGGC TGCTATCGGT 
ACGTTACGTG GTCCACTTCA TGGCGGTGCG AACGAAGCGG CGATGGAGAT GATTCAAGAT 
TGGCAAACGC CAGATGAAGC AGAAGCCAAT ATTCTGCAAA TGCTAGAGAA AAAAGACAAA 
ATCATGGGCT TTGGTCATGC GATTTACCGC GAAAGTGACC CTCGTAATGC ACTGATCAAG 
CGTTGGTCAG AAGCGTTATC TAAAGAGGTG GGTGACAAAC ATCTTTATGC GGTTTCGGAG 
CGCGTGGAAT CTGTCATGAA GCGAGAGAAA GGTCTGTTCT GTAATGCCGA CTTCTTCCAT 
GCTTCGGCTT ACCACTTTAT GGATATTCCA ACCAAATTGT TTACACCAAT CTTTGTGATG 
AGTCGACTGA CAGGTTGGGC GGCGCACGTG TATGAACAAC GCGCGAACAA TCGAATCATT 
CGCCCAAGTG CGGATTATAC CGGACCGGAT CATCAAGACT GGGTGCCAAT CGAACAACGC 
TAG
 
Protein sequence
MPHSVENKAE IGGAGLRGQS AGSTALCTVG KTGTGLTYRG YDITDLANHA QFEEVAHLLL 
RGHLPNQQEL DAYKTHLLSL RGLPAELKQS LELIPADAHP MDVMRTGCSM LGNLEQEMDF 
EQQLHATERM LALFPAIICY WYRFSHDGVR IKTHDNSEDC IGGYFLKLLT DKAPSETHIK 
VMHCSLILYA EHEFNASTFA ARVCASTLSD LHSCITAAIG TLRGPLHGGA NEAAMEMIQD 
WQTPDEAEAN ILQMLEKKDK IMGFGHAIYR ESDPRNALIK RWSEALSKEV GDKHLYAVSE 
RVESVMKREK GLFCNADFFH ASAYHFMDIP TKLFTPIFVM SRLTGWAAHV YEQRANNRII 
RPSADYTGPD HQDWVPIEQR