Gene VIBHAR_02363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02363 
Symbol 
ID5555866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2366041 
End bp2367138 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content47% 
IMG OID640907849 
Producthypothetical protein 
Protein accessionYP_001445552 
Protein GI156974645 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAC ATCAATTTCA ACCTGATCTT CCACCACCGG CGAACACTGT CGGAGTAATA 
GGTTGGCTAC GCAAAAACTT ATTCAATGGG CCGGTGAACT CCATCGTCAC GCTTATCCTC 
GCTTACATCG TGTTCTCAGC CCTTTGGAAC ATTATTGATT GGGCATTTAT TAATGCGGAT 
TGGATTGGCG CAACCAGAGA CGACTGTACA CGCGAAGGAG CCTGTTGGGT ATTCATCAGC 
GTTCGCTGGG AACAGTTCAT GTATGGATTC TATCCAGAAG CTGAACTCTG GCGCCCTCGC 
CTGTTCTACA TCACATTGGC GATCTTTACA GTGCTACTCG CTTACGAGAA AACGCCGAAA 
CGCATTTGGA TTTGGTTGTT CTTCGTAAAC ATTTACCCAT TCATTATTGC CGCATTGCTT 
TACGGTGGCG TATTTGGTCT TGAAGTCGTT GAGACACACA AATGGGGTGG TCTATTAGTT 
ACGTTGATCA TTGCGCTTGT TGGTATCGTT GTTTCTTTAC CAATTGGTGT TGCGTTAGCA 
CTCGGTCGAC GTTCAGATAT GCCAATTATT CGCAGTATCT GTACGGTGTA CATTGAAGTG 
TGGCGCGGTG TCCCACTCAT TACTGTTCTG TTCATGGCAT CGGTCATGCT ACCGCTGTTT 
TTAGCGGAAG GCTCCGAAAC TGACAAGCTG ATCCGTGCGC TAATAGGTGT GGTTATGTTC 
AGTGCCGCCT ACATGGCGGA GGTAGTGCGT GGTGGCTTGC AAGCGATTCC GAAAGGACAA 
TATGAAGCGG CGGATGCTCT TGGTCTTAGC TACTGGAAGA AAATGGGACT GATCATTTTG 
CCTCAGGCGC TGAAGATCAC TATCCCTTCA ATCGTGAACA CGTTCATCGG CCTGTTTAAA 
GATACCAGTC TTGTGCTTAT TATCGGTATG TTTGACGTAC TGGGCATTGG ACAAGCCGCG 
AATACCGACC CTGAGTGGTT AGGTTTCGCA ACCGAAAGTT ATGTATTTGT CGCGTTAGTG 
TTTTGGGTAT TTTGTTTTGG CATGTCACGT TACTCGATAT GGCTTGAAAA CAAACTTCAT 
ACCGGTCACA AACGATAA
 
Protein sequence
MSTHQFQPDL PPPANTVGVI GWLRKNLFNG PVNSIVTLIL AYIVFSALWN IIDWAFINAD 
WIGATRDDCT REGACWVFIS VRWEQFMYGF YPEAELWRPR LFYITLAIFT VLLAYEKTPK 
RIWIWLFFVN IYPFIIAALL YGGVFGLEVV ETHKWGGLLV TLIIALVGIV VSLPIGVALA 
LGRRSDMPII RSICTVYIEV WRGVPLITVL FMASVMLPLF LAEGSETDKL IRALIGVVMF 
SAAYMAEVVR GGLQAIPKGQ YEAADALGLS YWKKMGLIIL PQALKITIPS IVNTFIGLFK 
DTSLVLIIGM FDVLGIGQAA NTDPEWLGFA TESYVFVALV FWVFCFGMSR YSIWLENKLH 
TGHKR