Gene VIBHAR_02361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02361 
Symbol 
ID5555858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2363701 
End bp2364753 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content47% 
IMG OID640907847 
Producthypothetical protein 
Protein accessionYP_001445550 
Protein GI156974643 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCATA CAGGAAGGAT ACAAATGGCG AATAAACTCA CAGTTCTTGC TTCCGTCGTA 
GCGGCTTCTA CTGCAATGAT GGCGACTTCA GCTCAAGCAG CAGACACTAC TCTGGACAAA 
GTCACAAAAC AAGGTTTTAT TACTTGTGGC GTAAGTACCG GTCTACCTGG TTTCTCAAAC 
CCTAACTCAA AAGGTGAATG GGAAGGTATC GACGTAGAAT ATTGCCAAGC ACTGGCTGCA 
GCCGTTCTTG GGGATAAAAC GAAAGTTAAA TATGTACCTC TTACCGCGAA AGAACGTTTC 
ACTGCACTTC AATCGGGTGA AATCGATGTG CTTTCACGTA ACACCACCTG GACACTACAC 
CGTGATACGG CTCTTGGCTT GAACTTTGTC GGCGTTAACT ATTACGACGG TCAGGGCTTC 
ATGGTTAAGA AAGATCTTGG TGTATCAAGT GCGAAGGAGC TTGATGGCGC ATCAGTGTGT 
GTACAGTCAG GTACGACAAC GGAGCTTAAC TTGGCGGACT ACTTCCGCAA CCAAGGTATG 
GCATACAAAC CCGTCGTATT TGATACAGCT GCACAAACTT CTAAAGGTTT TGATGCTGGT 
CGCTGTGACA TACTGACGAC GGACCAATCT GGTCTGTATG CTCTGCGTTT AAACCTTAAA 
GACCCTTCTT CTGCAACCGT TCTTCCTGAA ATCATCTCTA AAGAGCCTCT AGGCCCAGTG 
GTACGTCAAG GTGATGACCA ATGGTTCAAT ATTGCCAAGT GGACTCTATT TGCGATGGTC 
AATGCGGAAG AGTATGGCAT TAGCTCTAAG AATGCTGATG AGATGTTGAA ATCGAAAGAT 
CCAAACATCA AACGTATTCT TGGTGTGGAT GGTCCGAAAG GTAAAGGTCT AGGCATTCGT 
GACGATTGGG GCTACCAAGT TATCAAGCAA GTAGGTAACT ATGGCGAAAG CTTCGAGCGT 
ACGGTTGGTA CTGGTTCACC GCTGAAAATT TCTCGTGGTG TGAACGCACT ATGGAATGCA 
GGCGGCTTCA TGTACGCGCC ACCAATCCGC TAA
 
Protein sequence
MDHTGRIQMA NKLTVLASVV AASTAMMATS AQAADTTLDK VTKQGFITCG VSTGLPGFSN 
PNSKGEWEGI DVEYCQALAA AVLGDKTKVK YVPLTAKERF TALQSGEIDV LSRNTTWTLH 
RDTALGLNFV GVNYYDGQGF MVKKDLGVSS AKELDGASVC VQSGTTTELN LADYFRNQGM 
AYKPVVFDTA AQTSKGFDAG RCDILTTDQS GLYALRLNLK DPSSATVLPE IISKEPLGPV 
VRQGDDQWFN IAKWTLFAMV NAEEYGISSK NADEMLKSKD PNIKRILGVD GPKGKGLGIR 
DDWGYQVIKQ VGNYGESFER TVGTGSPLKI SRGVNALWNA GGFMYAPPIR