Gene VIBHAR_02335 details

Gene Information

• Locus tag: VIBHAR_02335
• ID: 5555667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 2325796
• End bp: 2327715
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640907821
• Product: ABC transporter ATPase component
• Protein accession: YP_001445524
• Protein GI: 156974617
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAC TTACCATTCA TAACGCACAA CTTGCATTTG GTGATCACCC ATTGCTAGAT 
AAAGCGGAGT TCGCTCTTCA AGAAAACGAA CGCGTTTGTT TAGTTGGTCG TAACGGTGCA 
GGTAAGTCCA CGTTAATGAA AGTGCTTGCC GGCGACATTT TGTTGGACGA TGGCAAGATT 
CAAATCACTC AAGACGTAGT TGTTTCTCGA CTTGAACAAG ATCCACCGCG CAATCAAGCG 
GGTACGGTTT ACGAATACGT ATCTGGCGGT TTGGCTGAAA TCGGTGAACA GTTAAAGATC 
TACCACGATC TTCTCGATCT TGTAGCTCAA GACCCAAGTG AAAAGAACAT CAATCGACTT 
GCTAAGATTC AAGAACAGCT GGATCACCTT AATGCTTGGC GCTTTGATGA CCGTGTTAAG 
AACGTACTTG GGGCGCTAAA GCTAGACCCA GAAACCAAAC TAACGGACTT ATCTGGTGGT 
TGGCAACGCA AAGCAGCTCT GGCTCGTGCA CTTGTTTGTG ACCCCGATGT ATTGCTTCTC 
GATGAACCGA CTAACCACCT TGATGTGACC ACCATCGAAT GGCTAGAGAA CTTCCTAAAA 
GATTTCAAAG GTTCCATCAT CTTTATCTCT CACGATCGTG CGTTCATCAA GTCGATGGCA 
ACACGTATCG TTGACTTAGA TCGCGGTCAA TTGGCTTCTT TCCCTGGTAA CTATGACCAA 
TACTTGAATG ACAAAGAAGA GATGCTTCGT GTTGAAGAGA TGCAAAATGC AGAGTTCGAC 
AAAAAGCTAG CTCAGGAAGA AGTATGGATT CGTCAGGGTA TTAAAGCGCG TCGTACACGT 
AACGAAGGTC GCGTTCGTGC TCTTAAAAAG CTGCGTGAAG AACGTCGTGA CCGCCGTGAA 
GTGCAAGGTA AAGTTAACCT TAATATCGAT GATGCATCGC GTTCGGGCAA GATCGTCTTT 
GAAGCAGAGA ACGTCTCTTT TGCTTTTGAA GGCAAAAAGA TCGTTGATGA CTTCAGCTTC 
AACATCATGC GCGGTGATCG AATCGCACTT ATTGGCCCTA ATGGCTGTGG TAAAAGTACG 
GTTCTCAAGT TGCTACTAGG CCAGTTAGAG ACACAAGGTG GTCGTCTACA TTGCGGTACA 
AAACTTGAAG TGGCTTACTT CGACCAGTAC CGTGAAATCC TCGATCCGGA AAAAACGGTT 
ATCGATAACC TAGCGGATGG TAAGCAAGAA GTGATGGTTG GCGGTCGTCA GCGTCATGCA 
TTGAGCTACC TGCAAGATTT CTTGTTCGCA CCAAAACGTG CTCGTACGCC AGTTAAAGCG 
TTATCAGGCG GTGAAAAAAA CCGTTTGTTG TTGGCTCGTA TCTTATTGAA ACCTAACAAC 
TTGCTTATTC TGGACGAACC AACCAACGAT TTGGACATCG AAACGTTGGA ACTTTTAGAA 
GAAATGCTTG CCAATTATCA GGGTACGTTA CTGTTAGTGA GCCACGACCG TGAGTTTGTA 
GATAACACAG TAACGACCAG TTGGATTTTT GAAGGTAACG GCGTAATCGA AGAGTTCGTT 
GGTGGTTATC ACGATGCAAA ACAGCAGCGT GATCAAGTTC TTGCTTCGCG TGGTCAGGTT 
GAAAAAGCAG CGAAGAAAGA GAAAGTGGTT GAGGAAACTC CCAAAACTAC GCAACCTAAG 
AACAATTCGA AGAAGTTATC GTATAAGCTG CAAAGAGAAT TAGAGGCTCT TCCAGCTAAA 
CTAGAACAAT TAGAGTCGGC TATTGAGACT CTGCAAGAAC AAGTGAATGA CCCAGAGTTC 
TTCACTAAAT CTGTAGAACA GACTCAACCG GTATTGGAAC AGCTCGCTGC TGTAGAGCAG 
GAGTTGGAAA TCGCGTTCGA GAGATGGGAA GAACTCGAAG CAATGCAACA GGACAGTTAA 

 

Protein sequence

MALLTIHNAQ LAFGDHPLLD KAEFALQENE RVCLVGRNGA GKSTLMKVLA GDILLDDGKI 
QITQDVVVSR LEQDPPRNQA GTVYEYVSGG LAEIGEQLKI YHDLLDLVAQ DPSEKNINRL 
AKIQEQLDHL NAWRFDDRVK NVLGALKLDP ETKLTDLSGG WQRKAALARA LVCDPDVLLL 
DEPTNHLDVT TIEWLENFLK DFKGSIIFIS HDRAFIKSMA TRIVDLDRGQ LASFPGNYDQ 
YLNDKEEMLR VEEMQNAEFD KKLAQEEVWI RQGIKARRTR NEGRVRALKK LREERRDRRE 
VQGKVNLNID DASRSGKIVF EAENVSFAFE GKKIVDDFSF NIMRGDRIAL IGPNGCGKST 
VLKLLLGQLE TQGGRLHCGT KLEVAYFDQY REILDPEKTV IDNLADGKQE VMVGGRQRHA 
LSYLQDFLFA PKRARTPVKA LSGGEKNRLL LARILLKPNN LLILDEPTND LDIETLELLE 
EMLANYQGTL LLVSHDREFV DNTVTTSWIF EGNGVIEEFV GGYHDAKQQR DQVLASRGQV 
EKAAKKEKVV EETPKTTQPK NNSKKLSYKL QRELEALPAK LEQLESAIET LQEQVNDPEF 
FTKSVEQTQP VLEQLAAVEQ ELEIAFERWE ELEAMQQDS