Gene VIBHAR_02294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02294 
Symbol 
ID5555503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2292795 
End bp2293742 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content45% 
IMG OID640907780 
Productuniversal stress protein UspE 
Protein accessionYP_001445483 
Protein GI156974576 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAT ACAGTAAGAT CCTTGTTGTT GCTGACATCA ATAACGATGA GCAGCCAGCA 
CTTGCAAGAG CGGTTCAACT CGCTCGAAAA AGTGTATCCA GAAGCCGAAT CACTTTCTTT 
CTGTCAATCT ACGATTTTTC GTATGACATG ACCTCAATGC TGTCGGTCGA TGAAAGAGAT 
GCTATGCGTC GCGGTGTTAT CCACCAACGT GAACAATGGA TGCGTAAGAT AGCCCAACCG 
TATTTAGACG ATAGCTTCGA CTTTGATGTT TGTGTTGTTT GGCATAATCG CCCTTATGAA 
GCGATCATTG CTGAAGTCTT TGCTGGCGGC CACGACATCG TTATTAAGGG AACGCGTAAA 
CACGATGTTC TAGAATCCGT CATTTTCACT CCTACAGATT GGCATTTGTT GCGTAAGTGC 
CCTATCCCTG TGCTTCTAAT TAAGAACTCC GATTGGCCAG AGCACGCGAA GATTCTCGCG 
TCTGTTCATG TAGGTTCGGA AAACCCAACG CACATTGATT TGAACGATTC AATGGTCGAG 
CGCCTTAAAG AAATCACCAA TCGTCTCGAT GCTGAACCGT ATCTCGTTAA TGCCTATCCG 
GTTACTCCGG CGAATATTAC GATTGAATTG CCTGAGTTTG ACCCAACAAC GTACACAGAT 
GCAGTTCGTG GGCATCACCT AACCGCAATG AAAGCACTTC GCCAAAAGCA TGGTTTGGAT 
GAAGAGCAAA CAATTGTTGA ACAAGGTCTG CCAGAAGACA TTATTCCTGC AACGGCAGAA 
AAGCTTAATG CAGCAATGGT TATTCTTGGT ACGACAGGTC GTACGGGGCT TTCGGCGGTG 
TTTATTGGTA ACACAGCGGA GCATGTGATT GATAAAATCA ATTGCGACGT ACTGGCATTG 
AAACCAAACG GTTACATCAG TCCGCTCGAT CCAAATACAG CGACATAA
 
Protein sequence
MSIYSKILVV ADINNDEQPA LARAVQLARK SVSRSRITFF LSIYDFSYDM TSMLSVDERD 
AMRRGVIHQR EQWMRKIAQP YLDDSFDFDV CVVWHNRPYE AIIAEVFAGG HDIVIKGTRK 
HDVLESVIFT PTDWHLLRKC PIPVLLIKNS DWPEHAKILA SVHVGSENPT HIDLNDSMVE 
RLKEITNRLD AEPYLVNAYP VTPANITIEL PEFDPTTYTD AVRGHHLTAM KALRQKHGLD 
EEQTIVEQGL PEDIIPATAE KLNAAMVILG TTGRTGLSAV FIGNTAEHVI DKINCDVLAL 
KPNGYISPLD PNTAT