| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02221 |
|---|
| Symbol | |
|---|
| ID | 5553881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2219373 |
|---|
| End bp | 2220800 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640907708 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445411 |
|---|
| Protein GI | 156974504 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT TAAGGGACAA CCTCACTCTT TTACTGCACG GGGCATGGCG ACGCCGTTAC
CTGCTCGTCA TCCCTATGAT AGTGCTACCT ATTTTGGGCT TTCTTATCAG CAAAGCAGTG
CCGACTAAGT ATGTGGCTCA CACCAGCATG CTGATCCAAG AAACGGCCAA AATGAACCCA
TTCCTTCAAG ACCTTGCCGT TTCAACCATG TTGAAAGACC GCTTGAGTGC TTTGAGTACC
CTACTTAAAA GCCGCCATGT GCTGTATTCC GTTGCAAAAG AGCAAGGCTT GATCGACGAT
ACTATGGACG CTAACGAACA AGAGTTCATC ATAAAAGACC TTGCTAATCG CTTAACGGTT
CAACAACTCG GTAAGGACTT CATTCAAATC CAACTCACGA GCAGCCAATC AGAAGGGATG
GAAGCGGTGT TAAGCTCTGT CAGCAATCAC TTTGTCGAAC AGCTCTTAGC GCCAGAGCGC
TCATCAATAA AGGATTCTAG CCACTTCTTG ACTATTCACA TTGATAAACG CCGTGAAGAA
TTGGACAAAG CGGAACAAGC TTTTGCTGAA TACAAAAACG CTTATTCTCA TGCAACACCA
GCGATGCAAG CACAGAGCTT GACGCGTCTC GCCAGCTTAA AACAAACATT GGCAGAGAAG
GAAGCCGAGT TAGCGGGTGT CAAGCGTAGC CTTGGTAGCT TAGACCAGCA ACTTTCAAAG
ACCAATCCAG TGATTGGTAA GATTGAAGAG CAAATTATCG AGATTCGAAG TGAGCTCACT
CTATTGCGTG CACGATACAC AGAAGCACAC AGTTCAGTGC AAGGTAAACT ACGTGAGTTG
AATCGCCTGG AACAGGAGCG CTCAGTACTA CTCAACTCAA AACAACCGGA AATGAACAGT
GACCAACTTT GGGATATTGC AAGTACAACG ACCATAAGCA CGATTGGTGA TGCTCAACCG
CTGCTTGTAT CTCAACTCCG CCAACTGCAA ATCATGCGCG GCCGTTACGA GTCTTTGGAA
GAAGAGACGA TTAGCCTTAG AAACATGATC CAAGAGCTGG AAAGCGACGC CAATCGCTTT
GGTAGCACAG CAACAGAGAT CAATCGACTT GCTCGTGATG TCGCTGTAAA GCGTGAACTT
TATGATGATC TGGTTGAACG TTACGAGATG GCGCAATTGA CCGGATCTTT AGGTGTTTTT
GAAGAAAACA AACGCGTAAA AGTTATCGAT GAGCCTTACA CGCCAACCTT GCCAGCTAAC
TTACCTGCTA TTATCTTTGT CCTTCTTGGA TTAATTGGGG GGGCAGGTTT AGGCATTGGC
CTTGCCACCA TTGCAGAACT GGCAGATAAC TCTATTCGCT CTCGCAAAGC ATTGGAAAAA
CACCTTGGCG CTCCTGTCAT CACTACCATC CCTAAAATCA TATTCTGA
|
|---|
| Protein sequence | MSDLRDNLTL LLHGAWRRRY LLVIPMIVLP ILGFLISKAV PTKYVAHTSM LIQETAKMNP
FLQDLAVSTM LKDRLSALST LLKSRHVLYS VAKEQGLIDD TMDANEQEFI IKDLANRLTV
QQLGKDFIQI QLTSSQSEGM EAVLSSVSNH FVEQLLAPER SSIKDSSHFL TIHIDKRREE
LDKAEQAFAE YKNAYSHATP AMQAQSLTRL ASLKQTLAEK EAELAGVKRS LGSLDQQLSK
TNPVIGKIEE QIIEIRSELT LLRARYTEAH SSVQGKLREL NRLEQERSVL LNSKQPEMNS
DQLWDIASTT TISTIGDAQP LLVSQLRQLQ IMRGRYESLE EETISLRNMI QELESDANRF
GSTATEINRL ARDVAVKREL YDDLVERYEM AQLTGSLGVF EENKRVKVID EPYTPTLPAN
LPAIIFVLLG LIGGAGLGIG LATIAELADN SIRSRKALEK HLGAPVITTI PKIIF
|
|---|
| |