Gene VIBHAR_02179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02179 
Symbol 
ID5555790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2177965 
End bp2179002 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content48% 
IMG OID640907666 
Product2-oxopent-4-enoate hydratase 
Protein accessionYP_001445371 
Protein GI156974464 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG CAACCAAGAA AAATGGCTCT CGCGATGGTC TGTTGATGGT CGTGAGCAAA 
GACCTGACAC AATGTGTTCC GGCAACCGAA ATTTTCCACG CGATGCATCT CGCTCCAACC 
ATGCAAGTGG CATTGGATAA ATGGGACAAA GTCGCTCCAC AACTGGAAGA GCTTTATAAC 
GCGCTAAACA ATGGTTCGGT TTCAGGAAGT GAAGAGTTTG AATCCCACTA TCTAGCATCA 
CCATTGCCTC GCGCCTATCA ATGGGCGGAT GGCAGTGCTT ACGTCAATCA CGTCGAACTA 
GTGCGTAAAG CGCGTGGTGC GGAAATGCCA GAAAGCTTCT GGACCGATCC TTTGATGTAT 
CAAGGTGGTT CTGACGCATT TATTGGTCCT TGCGACAACA TCGGATTTGC GAGCGACGAG 
TGGGGGATTG ACTTCGAAGG TGAAGTTGCC GTGATCACCG GTGACGTGCC GATGGGAGCA 
AGCATTGCAG AAGCACAAGA TTCAATTCGT CTTATCATGC TAGTTAACGA TGTATCGTTG 
CGTGGTTTGA TTCCGGCGGA GCTGGCTAAA GGCTTTGGTT TCTTCCAATC AAAACCGTCT 
TCAGCGTTTT CTCCTGTTGC AGTAACGCCA GATGAGCTGG GTGAAGCATG GTATGAGAAC 
AAAGTTCATT TGCCTTTGGT TTCAACCTAC AACAACGCGC CATTTGGCTG CCCAAACGCA 
GGCATAGACA TGACGTTTGA TTTCGCTGAT TTGATTGTTC ATGCCAGCAA AACACGTCCA 
CTTTCTGCAG GTGCAATCAT TGGCTCGGGT ACAGTATCGA ACAAACAAGG CACGGAGCAC 
GGAACCTCTA TCGAAGAGGG TGGCGTAGGC TACTCATGTA TCGCAGAAGT GCGCATGATT 
GAAACCATTC GTGATGGCAA ACCGTCAACG AGCTTTATGT CGTTTGGTGA CTCAATCAAG 
CTAGAGATGT TTGACGCAGA TGGTAACTCG ATCTTTGGTG CGATTGATCA GCAAGTCAGC 
CAATACCTAA AAAACTGA
 
Protein sequence
MKLATKKNGS RDGLLMVVSK DLTQCVPATE IFHAMHLAPT MQVALDKWDK VAPQLEELYN 
ALNNGSVSGS EEFESHYLAS PLPRAYQWAD GSAYVNHVEL VRKARGAEMP ESFWTDPLMY 
QGGSDAFIGP CDNIGFASDE WGIDFEGEVA VITGDVPMGA SIAEAQDSIR LIMLVNDVSL 
RGLIPAELAK GFGFFQSKPS SAFSPVAVTP DELGEAWYEN KVHLPLVSTY NNAPFGCPNA 
GIDMTFDFAD LIVHASKTRP LSAGAIIGSG TVSNKQGTEH GTSIEEGGVG YSCIAEVRMI 
ETIRDGKPST SFMSFGDSIK LEMFDADGNS IFGAIDQQVS QYLKN