Gene VIBHAR_01961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01961 
Symbol 
ID5554816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1960371 
End bp1961039 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID640907448 
Producthypothetical protein 
Protein accessionYP_001445153 
Protein GI156974246 
COG category[S] Function unknown 
COG ID[COG3645] Uncharacterized phage-encoded protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATGA GTAGTCGAGA GATTGCAGAG CTGACAGGTA AGCAGCACTC ACACGTTAAA 
CGAGATATTG AACGAATGGT GGCTGAGTTG AACCATCCAA ATTTGGAGGG TTCCCAATTT 
TGGCATAAAG GCAACCAGTA CACTCAATAT CACTTGAATC GCGAGCTTAC TTTGACGTTG 
GTTTCTGGTT ACAACATCAA GTTACGTCAT TCCATTATCA AGCGGTGGGA TGAGTTGGAA 
AGTACAGGTA AACCATCTAT ACCGACAACG TATGCTGAAG CATTGCAGCT AGCCGCTAAC 
CAAGCGAAGG AACTGGAAGA AAAGAACCAG GCATTAGCTA TCGCAGCGCC AAAGGCCGAG 
TTTGCAGATG CGATTGCCGG AGCGGATAAA GGTGTGAAGC TCGGTCAGTT TGCTAAAACA 
GTAGGTTTGG GGCCTGTTAC TATTTTTCGT GTACTCCGGG AGTTAAAGAT CTTTATGAGT 
CGTGGAGATT CTTACAACTT GCCGTATCAG GAGTTTGTAG AACGTGGATA CTTTACGGTG 
AAGCAGGGCG CTTACGAAAC AAACTCCCAA ACTCGGATAA GCCACACAGC ATTGATTACT 
GGAAAGGGGG AAATCTGGCT GCGCAAAAAG CTGTTGGAGA CAGGTCACCT TAAGGCGGTG 
GCAGCATGA
 
Protein sequence
MTMSSREIAE LTGKQHSHVK RDIERMVAEL NHPNLEGSQF WHKGNQYTQY HLNRELTLTL 
VSGYNIKLRH SIIKRWDELE STGKPSIPTT YAEALQLAAN QAKELEEKNQ ALAIAAPKAE 
FADAIAGADK GVKLGQFAKT VGLGPVTIFR VLRELKIFMS RGDSYNLPYQ EFVERGYFTV 
KQGAYETNSQ TRISHTALIT GKGEIWLRKK LLETGHLKAV AA