Gene VIBHAR_01918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01918 
Symbol 
ID5555161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1928293 
End bp1929333 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content49% 
IMG OID640907405 
Producthypothetical protein 
Protein accessionYP_001445110 
Protein GI156974203 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC TAAAACAAAA ACAAGTCTTC AAAGAAAAAG TGATGCACAG TGAGGAAGAG 
GACGTATCCC CAGAGTTGAA TACGCAGAAG ACGTTCTCTG AAAAAGAGAC CTTCATACCC 
GTTGAGATTG AAGAGCAACA GAAAGAGACA GAGCAAGAGT TGCAGCTCGA ACAAGTCATT 
CGCCCCAAAT CTGGTCGCAA ATGGCTGACA ACGGGTCTCT TTGCCACCTT CGCTGGTTTA 
GTTGTCTGGC AAGCGGTTGA TTCTGTGATT ACCGCTATAC AAACTGCTGA TTGGCTAGCG 
CTTGGTTGGG TTGGCTTTAT CACTACCATC GCTTCTTTTG GTTTAGGCGC GTTAGGCAAA 
GAGTTATGGA AGCTGCGCAA ACTGCGTAAT CACTTTAGTG TGCAAGAAGA GAGTGAAGCG 
CTTATCGATA GCCAAAGCGT CGGCAAGGGC AAAGCATTTT GTGAAAAAGT CGCGGAGCAA 
AGTGGTGTAC TGGCAGAGAA CCCAGGTTTT GATCGTTGGA AAAACAGCGT AAACCCAGCT 
CACAGTGACG CTGAAATTCT AGAGATGTAC GATTCCATGG TCGTTAGCCA GCAAGATAAG 
CTCGCAACCA AAATTGTTTC GCAGCACGCT ACCGAATCCG CAGCTTTGGT AGCCGTTAGC 
CCGTTGGCAG CCGCTGACAT GTTGCTAGTG GCATGGCGTA ACTTCAAAAT GATCGACAAT 
CTTTCTAAAG TATATGGCGT GGAGCTTGGC TACGCTTCTC GAATTAAACT GCTCCGCTCT 
GTGTTCGTGA ATATGGCGGC AGCGGGTGCG AGTGAGCTCG CTATTGATGC CAGCATGGAT 
TTGATGTCGA TGGATCTCGC CGGAAAAATC TCCGCACGAG CAGGGCAGGG ACTCGGTGTA 
GGGATCTTAA CCGCTCGTCT TGGTCTAAAA TCCATGGCGT TGCTTCGTCC TTTACCTTGG 
TATCCAGAGC GCCAAGTGAA ACTCGGTGCG ATTCGCAAAG AGGTTGTGGC GAAAGTTGCA 
TCAATCACGA TGAAACCGTA A
 
Protein sequence
MSELKQKQVF KEKVMHSEEE DVSPELNTQK TFSEKETFIP VEIEEQQKET EQELQLEQVI 
RPKSGRKWLT TGLFATFAGL VVWQAVDSVI TAIQTADWLA LGWVGFITTI ASFGLGALGK 
ELWKLRKLRN HFSVQEESEA LIDSQSVGKG KAFCEKVAEQ SGVLAENPGF DRWKNSVNPA 
HSDAEILEMY DSMVVSQQDK LATKIVSQHA TESAALVAVS PLAAADMLLV AWRNFKMIDN 
LSKVYGVELG YASRIKLLRS VFVNMAAAGA SELAIDASMD LMSMDLAGKI SARAGQGLGV 
GILTARLGLK SMALLRPLPW YPERQVKLGA IRKEVVAKVA SITMKP