Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01915 |
Symbol | |
ID | 5555463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1924819 |
End bp | 1926348 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640907402 |
Product | fumarate hydratase, class I |
Protein accession | YP_001445107 |
Protein GI | 156974200 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCATG CAATGACGGT AATACGCACG CAGGATGTCA TCAGCAGTGT TGCTGATGCG CTACAGTATA TTTCTTACTA CCACCCGCTA GACTTTGTTC AAGCCCTTGA AAAAGCCTAC CATCGTGAAG AGAGCCAAGC TGCGAAAGAC GCTATCGCTC AGATCCTAAT TAACTCCCGT ATGTCGGCAG AAGGCCATCG ACCGATTTGT CAGGACACAG GTATCGTGAC TTGTTTCGTC AATATCGGTA TGGGCGTTCA ATGGGACTCA ACCGACATGA CGGTTCAACA GATGGTGGAT GAAGGCGTTC GACAAGCTTA CACGAATCCG GACAACCCAT TGCGTGCCTC GGTTCTGATG GACCCTGCGG GCAAGCGAAT CAATACCAAA GACAACACGC CAGCGGTTGT ACATATCAAT ATGGTGCCAG GCGATAAAGT TGAAATTCAA ATCGCGGCGA AAGGCGGCGG CTCTGAAAAC AAAACCAAGA TGGTGATGCT AAACCCATCT GACGACATTG CAGAATGGGT AGAGAAAACC CTACCAGCAA TGGGCGCAGG CTGGTGTCCA CCGGGCATGC TTGGCATTGG TATAGGCGGT ACCGCTGAAA AAGCTGCGGT CTTGGCAAAA GAATCTCTGA TGGGGCACGT TGACATTCAA GAACTGATCG ATCGTGGTCC TCAAAATGCG GAAGAAGAGC TTCGTCTTGA TATCTTCAAC CGTGTAAACA AGCTGGGTAT TGGTGCGCAA GGCCTAGGTG GTTTAACAAC AGTTGTTGAC GTAAAAATCA AAACCGCGCC AACCCATGCC GCGTCTAAGC CTGTGTGCTT GATTCCGAAC TGTGCAGCGA CTCGTCACGT GCATTTCACT CTAGATGGCA ACGGTCCTGC TGAGCTAACG CCACCGAAGC TAGAAGATTG GCCAGATATT ACTTGGGAAG CGGGCGAGAA CACACGTCGC GTGAACTTAG ATACCGTGAC CAAAGAAGAA GTTCAAGAGT GGAAAACCGG TGAAACGGTT CTGCTGTCGG GCAAAATTCT AACTGGTCGT GATGCTGCGC ATAAACGCAT TCAAGGCATG CTAGAAGCGG GTGAAGGTTT ACCTGCTGGC GTTGATTTCA AGGGTAAGTT CATTTATTAC GTTGGCCCGG TTGATGCCGT CGGTGATGAG GCCGTAGGTC CTGCAGGTCC AACAACCTCA ACACGTATGG ATAAGTTCAC AGACATGATG TTAGAAGAAA CAGGCATTAT GGGCATGATC GGTAAAGCAG AGCGCGGTCC TGCAACAGTT GAATCTATCA AGAACCACAA AGCGGTTTAC TTAATGGCAG TTGGCGGCGC GGCGTACCTC GTTGCAAAAG CGATTAAGAA AGCTCGCGTG GTGGCATTCG AAGACCTAGG CATGGAAGCA ATCTACGAGT TTGAAGTTGA AGATATGCCA GTAACGGTTG CTGTGGATTC AAATGGCGCG AACGCTCACC AAATTGGTCC AGATACTTGG AAAGTAAAAA TCCAAGAAAT GGAAGCGTAA
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Protein sequence | MRHAMTVIRT QDVISSVADA LQYISYYHPL DFVQALEKAY HREESQAAKD AIAQILINSR MSAEGHRPIC QDTGIVTCFV NIGMGVQWDS TDMTVQQMVD EGVRQAYTNP DNPLRASVLM DPAGKRINTK DNTPAVVHIN MVPGDKVEIQ IAAKGGGSEN KTKMVMLNPS DDIAEWVEKT LPAMGAGWCP PGMLGIGIGG TAEKAAVLAK ESLMGHVDIQ ELIDRGPQNA EEELRLDIFN RVNKLGIGAQ GLGGLTTVVD VKIKTAPTHA ASKPVCLIPN CAATRHVHFT LDGNGPAELT PPKLEDWPDI TWEAGENTRR VNLDTVTKEE VQEWKTGETV LLSGKILTGR DAAHKRIQGM LEAGEGLPAG VDFKGKFIYY VGPVDAVGDE AVGPAGPTTS TRMDKFTDMM LEETGIMGMI GKAERGPATV ESIKNHKAVY LMAVGGAAYL VAKAIKKARV VAFEDLGMEA IYEFEVEDMP VTVAVDSNGA NAHQIGPDTW KVKIQEMEA
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