Gene VIBHAR_01869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01869 
Symbol 
ID5555634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1880930 
End bp1881892 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content46% 
IMG OID640907358 
Producthypothetical protein 
Protein accessionYP_001445063 
Protein GI156974156 
COG category[V] Defense mechanisms 
COG ID[COG4168] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTGGT ACGCCGTAAG ACGTCTTAAT CTATTTGTCA TCACTTTGAT GATTCTCACG 
TTAGTGGGCT TTTCGCTATT GCGTTTGGAT CCGAGTTCTC ATTGGGCAAA CGTTGAATTT 
TGGGCAGGCT GGCAAAGCTA CCTTGTTGAG CTATCACAGC TCAATTTTGG TATCAGCAAA 
AACGGAAATC CAATTTACGG TGAGTTAGCC ATTGTCTTCC CTGCAACACT CGAGTTGTGT 
TTCTTTGCCT TTGTCGTTTC ATTGCTTATC GGTATCCCGC TGGGCACGAT TGCAGGCATG 
AAACAGGGTA AATGGTTAGA TACCAGCATC TCATTTATAT CTATGTCTGG TTACTCGGCG 
CCTATCTTCT GGGTTGCGCT GATGTTGATC ATGATGTTCT CGTTGCAGTA TCACGTGTTC 
CCCGTTGCTG GCCGCTATGA CTTACTGTAC GAGATTGACC ACGTAACGGG TTTCGCCATC 
ATTGATGCCT TCATGGCAAA AGGTGAATAC CGAGCACACG CGCTGCAAAG CGTTATCGAA 
CACATGATCT TGCCATGTTT GGTATTAGCG CTTGCTCCTA CTACCCAAGT TATTGGCTTA 
ATGCGCGCAT CAGTGGCAGA AGTGATGAGC CAAAACTACA TCCGTGCTGC ACGAATCAAA 
GGTTTATCCA ACCGCGAGAT CGTGACACAA CACGTGCTAC GTAACGCCAT TCCGCCTATT 
GTTCCAAAAG TTGGTGTTCA GCTTTCTAGC ATGATCACGC TAGCGATCAT TACTGAATCT 
ATCTTCAACT GGCCGGGTAT TGGTCGTTGG TTGTTGGATG CACTTTCAAA TCAAGATTAC 
GCTTCCATTC AGGCAGGCGT AATGGTGCTA GCAACCCTTG TTTTAACTGC CAACATCCTT 
TCGGATTTGA TTGGTGCCAT GATTAACCCT CTGGTGAGAA AGGAATGGTA TGCTAACAAA 
TAA
 
Protein sequence
MFWYAVRRLN LFVITLMILT LVGFSLLRLD PSSHWANVEF WAGWQSYLVE LSQLNFGISK 
NGNPIYGELA IVFPATLELC FFAFVVSLLI GIPLGTIAGM KQGKWLDTSI SFISMSGYSA 
PIFWVALMLI MMFSLQYHVF PVAGRYDLLY EIDHVTGFAI IDAFMAKGEY RAHALQSVIE 
HMILPCLVLA LAPTTQVIGL MRASVAEVMS QNYIRAARIK GLSNREIVTQ HVLRNAIPPI 
VPKVGVQLSS MITLAIITES IFNWPGIGRW LLDALSNQDY ASIQAGVMVL ATLVLTANIL 
SDLIGAMINP LVRKEWYANK