| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01734 |
|---|
| Symbol | |
|---|
| ID | 5554881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 1738012 |
|---|
| End bp | 1738389 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640907225 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001444930 |
|---|
| Protein GI | 156974023 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02502] type III secretion protein, YscX family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCA TTAGTACGTT AAACGTCGGT ATTGAAGGCT TTACTCACGT TTCGCTTGAG
CAAGTTGAAA ACGACTTCCC ACAGCGTTTT CAGCTGTTGC CTGATGGTCA AGCCATCGCG
ACGCACCTAG AGAAACTTTA CGAGCTTCGC CCCTCTGAGC AGTACTTGAT GTCACTTGCC
AAGCCAAAGT TGACGCGTTC GGAGCTACTT CGCCCAGACA AATACCGTCA ACAGTTTGAT
ACCACTCAGC AGCGGCTTCG GGAAGTGGCG CAGAAAAATG GTTCGCATGC GCTCAATCAG
GCACTGGAAA CACTGCAAAG TACCCAATTA GACCAACGTT ATCTCACCAT GGCGTTGAAT
CTACTGATTC AGGTTTAA
|
|---|
| Protein sequence | MSRISTLNVG IEGFTHVSLE QVENDFPQRF QLLPDGQAIA THLEKLYELR PSEQYLMSLA
KPKLTRSELL RPDKYRQQFD TTQQRLREVA QKNGSHALNQ ALETLQSTQL DQRYLTMALN
LLIQV
|
|---|
| |