Gene VIBHAR_01579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01579 
Symbol 
ID5556141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1586476 
End bp1587165 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content45% 
IMG OID640907070 
Producthypothetical protein 
Protein accessionYP_001444776 
Protein GI156973869 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA AACTGATTTT AGGACTGATC CTAGTCGCGA CCATCCTCTT TCTAGGTGTA 
AATTTTGGTC AATACCTAAC CCTAGAAAAT GCAAAAGCAC AACAAGAGGC GTTAAATAGC 
TTTATTGACC AAAACTTCAT ATACGCCGCC GCGACCTATT TCTTTGCTTA TATCGCCATC 
ACTGCGTTTT CGATTCCAGG CGCAGCTGTC GTTACCCTGC TCGGTGCTGC CTTGTTTGGT 
TTTTGGACTA GCTTATTGTT GGTTTCTTTT GCCAGCACCA TCGGCGCTAC GATTGCTTTC 
TTGAGTAGCC GTTACCTATT GAGAGAATGG GTACAAAGTA AGTTTGGGAG TAAACTGAGT 
GCGATTAACC AAGGCGTTGA AAAAGACGGT GCCTTTTACC TGTTTTCTCT GCGCTTGATT 
CCCGTCTTTC CGTTTTTCCT TATCAACTTA TTGATGGGGT TAACACCGAT GACCATTGCG 
CGTTTTTACT TAACCAGCCA AATCGGTATG CTGCCAGGCA CTGCCGTGTA CTTAAACGCT 
GGTACTCAGC TCGCCACCAT CGATAGCCTA TCAGGTATTG TGTCGCCGAC CGTATTAGCG 
TCATTTGCGT TACTTGGTTT GTTCCCAATC ATCGCAAAAT GGGTTATGAA TAAAGTTCGC 
CCTGCTCAAG TACAAAACGG AAACGCTTAA
 
Protein sequence
MNKKLILGLI LVATILFLGV NFGQYLTLEN AKAQQEALNS FIDQNFIYAA ATYFFAYIAI 
TAFSIPGAAV VTLLGAALFG FWTSLLLVSF ASTIGATIAF LSSRYLLREW VQSKFGSKLS 
AINQGVEKDG AFYLFSLRLI PVFPFFLINL LMGLTPMTIA RFYLTSQIGM LPGTAVYLNA 
GTQLATIDSL SGIVSPTVLA SFALLGLFPI IAKWVMNKVR PAQVQNGNA