Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01549 |
Symbol | |
ID | 5555612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1557478 |
End bp | 1558248 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640907040 |
Product | amino acid ABC transporter, ATP-binding protein |
Protein accession | YP_001444746 |
Protein GI | 156973839 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATG TACCAGCGCT AGATATAAAA GACCTGCACA AAACATTTGG ACAGAATGAA GTCCTTAAAG GCATTTCACT TGCCGCTCAT AAAGGGGATG TTATCTCCAT CATTGGTTCT TCCGGTTCCG GTAAAAGTAC CTTCCTAAGA TGTATTAACC TTCTTGAAAC GCCTACTGCT GGTGAGATTT GGGTAAACGG TGAGCTTATC CAGATGAAAA ATAACCGAGC AGGAGAGTCC GTTCCAGCCA ATGAGAAACA AGTTCAACGT ATTCGTTCAC GCTTAGCCAT GGTGTTTCAG GGCTTTAACC TTTGGTCACA CTTAACGGTT CTAGAAAATG TGATTGAAGC GCCGGTGCAT GTACTTGGCG TACCAAAAGC ACAAGCGATT GAAAATGCAG AGCTGCTTCT GAAAAAAGTA GGGCTGTACG AGCGAAAAGA CTACTACCCA GGACACCTTT CAGGTGGTCA GCAGCAACGG GCGGCTATTG CTCGCGCTCT TGCTGTCGAT CCAGAAGTGA TGCTGTTCGA TGAGCCAACC TCCGCACTCG ATCCTGAGCT AGTTGGTGAA GTTTTGGGGG TAATGCGAGA TTTGGCAGAT GAGGGCCGAA CCATGTTGGT TGTGACTCAT GAAATGGCTT TTGCGCGTGA CGTATCTAAC CATGTGATGT TTTTACATCA AGGCTTAGTG GAAGAGCAGG GAGATCCAGC TAAGCTATTT ACAAGCCCCG ATTCGGAACG TTTACAGCAA TTTATCTCAT CTATCTACTA A
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Protein sequence | MNDVPALDIK DLHKTFGQNE VLKGISLAAH KGDVISIIGS SGSGKSTFLR CINLLETPTA GEIWVNGELI QMKNNRAGES VPANEKQVQR IRSRLAMVFQ GFNLWSHLTV LENVIEAPVH VLGVPKAQAI ENAELLLKKV GLYERKDYYP GHLSGGQQQR AAIARALAVD PEVMLFDEPT SALDPELVGE VLGVMRDLAD EGRTMLVVTH EMAFARDVSN HVMFLHQGLV EEQGDPAKLF TSPDSERLQQ FISSIY
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