| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01535 |
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| Symbol | |
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| ID | 5553487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1538688 |
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| End bp | 1540439 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640907026 |
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| Product | lipid transporter ATP-binding/permease protein |
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| Protein accession | YP_001444732 |
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| Protein GI | 156973825 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATAA ATACTGATGA AACGACCTGG CAGACGTTTA AGCGTCTATG GCAATTTATT
CGCCTTTATA AGTCAGGCAT TATCGTTGCC GTCATTGCAT TAGTGATTAA TGCACTTTCA
GATACCTATA TGATTTCTTT GCTAAAACCA CTTCTTGATG AAGGTTTTGG TAATGCGGAA
TCGGATTTTC TACGCACGCT TCCATTGATT GTTTTCGCCA TGATGTTCAT TCGTGGTGTG
AGCGGATTTG TCTCCACTTA TTGCTTGAGC TGGGTATCCG GCAACGTGGT GATGCAAATT
CGTCGCATGG TGTTTAATCA CTTCATGCAT ATGCCAGTTT CTTACTTTGA TAAAGAAAAA
ACAGGTAATT TACTGTCTCG TATTACTTAT GATTCGGAAC AGGTCTCTGC AGCAACCAGC
CAAGCGTTAG TCAGCATTGT GCGTGAAGGT GCGAGCATAA TCGGTCTTCT TGTGCTGATG
TTCTACAACA GCTGGCAGCT TTCTCTAGTA CTATTTGCTG TTGCACCAGT GGTGGCTTGG
GGCATTGGTA TTGTTTCTAA GCGATTCCGT AAGATTTCTA AGAACATGCA AACCATGATG
GGCCATGTGA CGGCGTCTGC TGAGCAAATG CTGAAAGGTC ATAAAGTCGT ACTAAGCTAC
GGCGGTCAAG ATATCGAAGG CAAACGCTTC GAAAAAGTCA GCAACCAAAT GCGTCAACAA
AGCATGAAGT TGGTGACGGC TCAAGCCGCA GCAAACCCAA TCATTCAAAT GATCGCGTCT
ATTGCGATTG TTGTTGTGCT TTACCTAGCA AGTATCGACT CAATCAAAGA TCAATTAACG
CCGGGTACAT TTACCGTTGT GTTCTCTGCA ATGTTTGGTT TGATGCGTCC GCTTAAAGCG
CTGACAAACG TAACCTCTCA GTTCCAACGT GGTATGGCAG CGAGCCAAAC CTTGTTTGCC
CTGGTAGACC TAGAGCCAGA GAAGAACGAA GGTAAGTTCA CTGTAGAACG TGCAAATGGC
GACGTTGCAG TAAAAGAAGT CAGCTTTACC TACGAAGGTG CAGAGAAACC GGCACTTGAG
AACGTGAGCT TTGATATTCC AAAAGGCAAG ACAGTTGCTC TTGTTGGTCG TTCAGGTTCG
GGTAAGAGTA CCATCGCTAA CTTATTCAAC CGTTTTTACG ACGTCAGCGG TGGTTCAATT
ACACTTGATG GCCACGATAT TCGTGACTAC GAGCTTAAGA ACCTGCGCGA GCAGTTTGCA
TTGGTATCGC AAAACGTACA TTTGTTTAAT GACACGATTG CAAACAACAT TGCTTACGCG
ACAGAAGATC AATACACACG TGAAGACATC GAACGTGCCG CTAAACTTGC TCACGTCACT
GAGTTCGTCA GCAAGATGGA AGACGGCCTT GATACGATGA TTGGTGAGAA TGGTGCGAGT
CTCTCTGGCG GCCAACGTCA ACGTGTCGCT ATTGCTCGTG CACTTCTGCG TGATGCCCCT
GTTTTGGTTC TTGATGAAGC GACATCAGCT CTGGATACGG AATCTGAACG TGCTATTCAA
TCGGCGCTGG ATGAACTGCA AAAAGACAAG ACGGTATTGG TGATTGCACA CCGACTGTCG
ACTATCGAGA ATGCAGATGA AATTCTAGTG GTAGATGAAG GCTCTATCGT TGAACGCGGT
AACCACGCGG AGCTGATTGC CAAGAAAGAT GGCGCGTACG CTCAACTTCA TCGAATCCAA
TTTGGTGCCT AA
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| Protein sequence | MSINTDETTW QTFKRLWQFI RLYKSGIIVA VIALVINALS DTYMISLLKP LLDEGFGNAE
SDFLRTLPLI VFAMMFIRGV SGFVSTYCLS WVSGNVVMQI RRMVFNHFMH MPVSYFDKEK
TGNLLSRITY DSEQVSAATS QALVSIVREG ASIIGLLVLM FYNSWQLSLV LFAVAPVVAW
GIGIVSKRFR KISKNMQTMM GHVTASAEQM LKGHKVVLSY GGQDIEGKRF EKVSNQMRQQ
SMKLVTAQAA ANPIIQMIAS IAIVVVLYLA SIDSIKDQLT PGTFTVVFSA MFGLMRPLKA
LTNVTSQFQR GMAASQTLFA LVDLEPEKNE GKFTVERANG DVAVKEVSFT YEGAEKPALE
NVSFDIPKGK TVALVGRSGS GKSTIANLFN RFYDVSGGSI TLDGHDIRDY ELKNLREQFA
LVSQNVHLFN DTIANNIAYA TEDQYTREDI ERAAKLAHVT EFVSKMEDGL DTMIGENGAS
LSGGQRQRVA IARALLRDAP VLVLDEATSA LDTESERAIQ SALDELQKDK TVLVIAHRLS
TIENADEILV VDEGSIVERG NHAELIAKKD GAYAQLHRIQ FGA
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