Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01445 |
Symbol | |
ID | 5556054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1460935 |
End bp | 1464048 |
Gene Length | 3114 bp |
Protein Length | 1037 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640906936 |
Product | hypothetical protein |
Protein accession | YP_001444643 |
Protein GI | 156973736 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACTTT CTGACGTTTC CGTAAAGCGC CCCGTTGCGG CGTTGGTATT GAGCATGCTG CTGTGTGTAT TCGGCTTTGT GTCGTTTACC AAGCTTGCAG TACGTGAAAT GCCAGACATC GAAAGTCCAG TTGTATCGAT CAGCACTCGT TACGAAGGCG CTTCTGCAAC CATCATTGAA AGCCAAATTA CTTCAGTACT GGAAGACCAA CTTTCGGGTA TCAGTGGTAT TGATGAAATC AGCTCCACTA CTCGAAACAG CATGTCGCGT ATCACCATCA CCTTTGAATT GGGTTATGAC CTTAATACGG GCGTAAGTGA CGTTCGTGAT GCGGTAGCTC GTGCTCAGCG TTCATTACCG GACGAAGCCG ACGACCCTGT AGTATTCAAG AACAACGGTT CGGGTGAAGC TTCCCTCTAT ATTAACCTTA GCTCGTCTGA AATGGACCGA ACCCAGCTAA CAGACTACGC CGAACGCGTT CTGATGGACC GTTTCAGTCT GATCTCTGGT GTAAGTTCTA TCGACTTGTC TGGTGGTCTT TACAAAGTCA TGTATGTGAA GCTTAAACCA GACCTGATGG CGGGTCGCTC GGTTACAGCA TCTGACATTA CAGCTGCTCT GCGAAGTGAA AACTTAGAAA GCCCGGGTGG TGAAGTTCGT AATGACTCAA CTGTGATGTC GGTGCGAACC GCACGTACTT ACAATACACC AGAAGACTTC CAATACCTTG TCGTGAAACG CGCAAGTGAT AACACACCTA TCTATCTAAA AGATGTGGCG GATGTGTTCA TCGGCGCAGA AAACGAAAAC TCGACCTTTA AGAGTGATGG TGTGGTTAAC ATCAGCTTAG GTGTTGTGCC TCAGTCTGAT GCAAACCCGC TAGAAGTGGC GCAGTCGGTA CGCTCTGAAG TCGATAAGAT TCAGAAGTTC CTGCCTGATG GGACTCGTCT AGCGATCGAT TATGACGCTA CCGTTTTTAT CGAGCGCTCA ATTGATGAGG TTTACAGCAC CCTCTTTATT ACGGGTGGCT TGGTAATTCT GGTTCTGTAC ATCTTTATCG GTCAGGCGCG TGCGACCCTG ATTCCGGCGG TGACGGTACC CGTTTCACTG ATTTCTTCGT TTATTGCGGC TTACTACTTT GGTTTCTCTA TTAACTTGAT CACCTTGATG GCACTGATCC TGTCTATCGG CCTGGTTGTG GACGATGCCA TCGTAGTCGT TGAGAACATC TTCCACCATA TTGAGCGTGG TGAATCACCA TTACTGGCGG CTTATAAAGG TACGCGAGAA GTAGGCTTCG CGGTTATCGC AACCACGTTG GTTCTTGTGA TGGTATTCCT ACCGATTTCC TTCATGGATG GTATGGTAGG CTTGCTGTTT ACCGAGTTCT CTGTATTGCT GGCTATGTCG GTGATCTTCT CGTCACTGAT TGCCTTGACA CTTACACCTG TTCTAGGCAG TCAGATCCTC AAAGCGAACG TGAAACCTAA CCGGTTTAAC CAAGCGGTTG ATAAATTGTT TGCTAAGCTG GAAGCGGGAT ATCGTAAAGC GCTGCGCGGT GCGTTGAAAG TTCGTTGGGC GGCACCTTTG GTTATCGTTG CGTGTATGGG CGGCAGCTAC GGCTTGATGA ATCAAGTACC GACACAGTTA ACCCCACAAG AAGACCGTGG TGTCATCTTT GCCTTCGTAC GTGGGGCGGA TGCAACGTCA TATAACCGTA TGTCGGCAAA CATGGACATC GTAGAGGATC GTTTGATGCC GCTTTTAGGC CAGGGTTTCC TGAAATCATT CAGCATCCAA ACGCCTGCGT TCGGTGGCCA AGCTGGTGAC CAAACGGGTT TCGTTATCAT GATCCTTGAA GATTGGAACG AACGTGACGT CACTGCACAA GAAGCCTTGA ACCAAGTACG TAAGTCATTG GCTGGCATTC CTGATGTTCG TGTTTTCCCA TTCATGCCGG GTTTCCGCGG TGGTTCGAGT GAGCCAGTGC AGTTCGTGCT TGGCGGCTCG GATTACGATG AGCTTTTAGT CTGGGCGGAA ATGCTTAAGA ACAAGGCCGA AGAATCACCA ATGATGGAAG GTGCGGAGAT CGATTACTCT GAGAAAACAC CAGAACTATT AGTCTCGGTT GATAAGCGCC GAGCAGCTGA ACTTGGTGTG AGTGTTCAAG ACATTTCTGA AACGCTAGAA ATTATGCTTG GTGGTAAGAG TGAAACCACT TATGTCGACC GCGGTGAAGA GTATGATGTT TACCTACGCG GTGATGAAAA CAGCTTCAAC AACGCGGCAG ATTTAAGCCA GATATACTTG CGAACCACGA GCGGTGAGCT GGTGACCTTG GACACGGTAA CCAAGATTGA AGAAGTGGCG GCATCGATCC GTTTGTCTCA CTACAACAAG CAAAAGTCGA TCACCATTAC TGCGAACTTG TCGGAAGGCT ACACTCTGGG TGAGGCATTG GACTTCCTCG ATCAAGAAGC GATTGATAAC CTCCCGGGTG ATATTTCAGT GAGTTACTCT GGTGAATCAA AAGACTTCAA AGAGAATCAA GCTAGCGTAG CGGTCGTATT CGCATTAGCA CTGTTAGTAG CGTATTTAGT ACTGGCAGCG CAGTTCGAAA GCTTCGTTAA CCCTCTGGTG GTAATGTTCA CTGTACCGAT GGGCGTATTT GGCGGCTTCC TCGGTTTGGT GGTGATGAGC CAAGGGATGA ACATATACAG TCAGATAGGC ATGATCATGT TGATCGGTAT GGTAACCAAG AACGGCATTT TGATCGTTGA GTTTGCTAAC CAGTTGCGTG ACCGCGGCAT TGAGTTTGAA AAAGCGATCA CGGATGCGGC AGCACGTCGT CTACGCCCGA TCATGATGAC AGCATTTACT ACTTTGGCTG GTGCGATTCC ACTGATTATG TCGACTGGTG CGGGTTATGA AAGCCGTGTG GCTGTTGGTA CCGTTATCTT CTTCGGTATG GGTTTTGCGA CGTTAGTTAC CCTGTTCGTT ATCCCTGCGA TGTACCGATT GATCTCAGCG AAGACGCGTT CACCTGGCCA TGTTGAAGCT AAGCTGAATA AAGCGCTTAG CCACGATACA AAAGGGCGTA TCGCGCACCC TTAA
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Protein sequence | MLLSDVSVKR PVAALVLSML LCVFGFVSFT KLAVREMPDI ESPVVSISTR YEGASATIIE SQITSVLEDQ LSGISGIDEI SSTTRNSMSR ITITFELGYD LNTGVSDVRD AVARAQRSLP DEADDPVVFK NNGSGEASLY INLSSSEMDR TQLTDYAERV LMDRFSLISG VSSIDLSGGL YKVMYVKLKP DLMAGRSVTA SDITAALRSE NLESPGGEVR NDSTVMSVRT ARTYNTPEDF QYLVVKRASD NTPIYLKDVA DVFIGAENEN STFKSDGVVN ISLGVVPQSD ANPLEVAQSV RSEVDKIQKF LPDGTRLAID YDATVFIERS IDEVYSTLFI TGGLVILVLY IFIGQARATL IPAVTVPVSL ISSFIAAYYF GFSINLITLM ALILSIGLVV DDAIVVVENI FHHIERGESP LLAAYKGTRE VGFAVIATTL VLVMVFLPIS FMDGMVGLLF TEFSVLLAMS VIFSSLIALT LTPVLGSQIL KANVKPNRFN QAVDKLFAKL EAGYRKALRG ALKVRWAAPL VIVACMGGSY GLMNQVPTQL TPQEDRGVIF AFVRGADATS YNRMSANMDI VEDRLMPLLG QGFLKSFSIQ TPAFGGQAGD QTGFVIMILE DWNERDVTAQ EALNQVRKSL AGIPDVRVFP FMPGFRGGSS EPVQFVLGGS DYDELLVWAE MLKNKAEESP MMEGAEIDYS EKTPELLVSV DKRRAAELGV SVQDISETLE IMLGGKSETT YVDRGEEYDV YLRGDENSFN NAADLSQIYL RTTSGELVTL DTVTKIEEVA ASIRLSHYNK QKSITITANL SEGYTLGEAL DFLDQEAIDN LPGDISVSYS GESKDFKENQ ASVAVVFALA LLVAYLVLAA QFESFVNPLV VMFTVPMGVF GGFLGLVVMS QGMNIYSQIG MIMLIGMVTK NGILIVEFAN QLRDRGIEFE KAITDAAARR LRPIMMTAFT TLAGAIPLIM STGAGYESRV AVGTVIFFGM GFATLVTLFV IPAMYRLISA KTRSPGHVEA KLNKALSHDT KGRIAHP
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